RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MAGEB6Q8N7X4 407 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 DPF2Q92785 391 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 LRRC27Q9C0I9 530 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 TAF6LQ9Y6J9 622 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 EIF3CLB5ME19 914 aaKnown RBP7.47□□□□□ -1.21
CPNE3-203ENST00000517490 FMNL1O95466 1100 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-203ENST00000517490 TBC1D8O95759 1140 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 LTKP29376 864 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 MAP2K2P36507 400 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 COPB1P53618 953 aaKnown RBP7.47□□□□□ -1.21
CPNE3-203ENST00000517490 GNGT1P63211 74 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 SAMD1Q6SPF0 538 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-203ENST00000517490 BCAS4Q8TDM0 211 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 OSBP2Q969R2 916 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 CCDC114Q96M63 670 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 EIF3CQ99613 913 aaKnown RBP7.47□□□□□ -1.21
CPNE3-203ENST00000517490 ADGRG1Q9Y653 693 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 H7C1D1 291 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 GPTP24298 496 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 MCM7P33993 719 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 TNNC1P63316 161 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 TMEM266Q2M3C6 531 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 REXO1L1PQ8IX06 675 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 TRIM58Q8NG06 486 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPNE3-203ENST00000517490 ATG3Q9NT62 314 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 PALLDQ8WX93 1383 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 PRAMEF22A3QJZ6 481 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 SH2B2O14492 632 aaPredicted RBP7.46□□□□□ -1.21
CPNE3-203ENST00000517490 CTDNEP1O95476 244 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 CYP7A1P22680 504 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 ASIC1P78348 528 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 EPHA10Q5JZY3 1008 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 AKNAD1Q5T1N1 836 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 DTHD1Q6ZMT9 781 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 HNRNPLLQ8WVV9 542 aaKnown RBP7.46□□□□□ -1.21
CPNE3-203ENST00000517490 ZKSCAN3Q9BRR0 538 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 MMRN2Q9H8L6 949 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 PRDM11Q9NQV5 511 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 TSKSQ9UJT2 592 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 ZNF609O15014 1411 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 ZNF532Q9HCE3 1301 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 LIG3P49916 1009 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 PAK2Q13177 524 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 CCDC40Q4G0X9 1142 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 LRRC24Q50LG9 513 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 CCDC93Q567U6 631 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 CAVIN4Q5BKX8 364 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 IFT81Q8WYA0 676 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 CDC5LQ99459 802 aaKnown RBP7.46□□□□□ -1.21
CPNE3-203ENST00000517490 NOC4LQ9BVI4 516 aaKnown RBP7.46□□□□□ -1.21
CPNE3-203ENST00000517490 SELENOOQ9BVL4 669 aa7.46□□□□□ -1.21
CPNE3-203ENST00000517490 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.21
CPNE3-203ENST00000517490 SRPRBQ9Y5M8 271 aaKnown RBP7.46□□□□□ -1.21
CPNE3-203ENST00000517490 GTPBP6O43824 516 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-203ENST00000517490 CCT5P48643 541 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 CCDC50Q8IVM0 306 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 ZNF579Q8NAF0 562 aaKnown RBP7.46□□□□□ -1.22
CPNE3-203ENST00000517490 ACRBPQ8NEB7 543 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 GDAP1L1Q96MZ0 367 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 CSRNP2Q9H175 543 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 KAT14Q9H8E8 782 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 ANKARQ7Z5J8 1434 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 UTYO14607 1347 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 DIP2CQ9Y2E4 1556 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 MMP1P03956 469 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 PTPREP23469 700 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 GNAQP50148 359 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 DNM2P50570 870 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 APBA1Q02410 837 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 PDE4BQ07343 736 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 UBE3CQ15386 1083 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 SHC4Q6S5L8 630 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 MB21D2Q8IYB1 491 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-203ENST00000517490 CSGALNACT2Q8N6G5 542 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 ZNF446Q9NWS9 450 aa7.46□□□□□ -1.22
CPNE3-203ENST00000517490 GOLGA6L10A0A0M3HER8 536 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 SSBP05455 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 IFNAR1P17181 557 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 IBSPP21815 317 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 MMS22LQ6ZRQ5 1243 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 TADA2BQ86TJ2 420 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 SEC63Q9UGP8 760 aaKnown RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 GBP2P32456 591 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 ATP6V1AP38606 617 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 CTDSPL2Q05D32 466 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 GIGYF2Q6Y7W6 1299 aaKnown RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 NOX5Q96PH1 765 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 FUT8Q9BYC5 575 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 IQSEC3Q9UPP2 1182 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 V9GY48 417 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 NUTM2BA6NNL0 878 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 NUTM2EB1AL46 878 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 KIF28PB7ZC32 967 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 GCOM1H8Y6P7 765 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 MYZAPP0CAP1 466 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 TCP1P17987 556 aaKnown RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 MSL1Q68DK7 614 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 MCTP2Q6DN12 878 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 SYMPKQ92797 1274 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms