RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 NR0B2Q15466 257 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 OLFML2BQ68BL8 750 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 MPRIPQ6WCQ1 1025 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 UBE3DQ7Z6J8 389 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 PPP1R13LQ8WUF5 828 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 RBCK1Q9BYM8 510 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 C19orf44Q9H6X5 657 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 ZNF552Q9H707 407 aaPredicted RBP3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 SIRT5Q9NXA8 310 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 DUSP13Q9UII6 198 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 IRAK3Q9Y616 596 aa3.31□□□□□ -1.88
RNU6-561P-201ENST00000516222 A0A0G2JLL6 359 aaPredicted RBP3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 OR14I1A6ND48 311 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 ESR1P03372 595 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 TRHRP34981 398 aaPredicted RBP3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 SERPINB4P48594 390 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 PRAMEF13Q5VWM6 474 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 CDH24Q86UP0 819 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 SP8Q8IXZ3 490 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 RIN3Q8TB24 985 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 XAGE3Q8WTP9 111 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 INTS4Q96HW7 963 aaKnown RBP3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 SIGLEC10Q96LC7 697 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 GPR160Q9UJ42 338 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 USTQ9Y2C2 406 aa3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 YBX2Q9Y2T7 364 aaKnown RBP3.3□□□□□ -1.88
RNU6-561P-201ENST00000516222 ENC1O14682 589 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 PDE4BQ07343 736 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 PDE4CQ08493 712 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 INPP5AQ14642 412 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 ZXDCQ2QGD7 858 aaPredicted RBP3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 PCNX4Q63HM2 1172 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 LRFN4Q6PJG9 635 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 ANKS4BQ8N8V4 417 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 PLPPR2Q96GM1 343 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 TMPRSS5Q9H3S3 457 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 FBRSQ9HAH7 460 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 TACC3Q9Y6A5 838 aa3.29□□□□□ -1.88
RNU6-561P-201ENST00000516222 PNMA6FA0A0J9YX94 578 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 MYOCOSA0A1B0GUC4 107 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 ZGLP1P0C6A0 271 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 GRK4P32298 578 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 AFF3P51826 1226 aaKnown RBP3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 CHMP4BP1P59074 171 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 SRSF3P84103 164 aaKnown RBP3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 NKG7Q16617 165 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 SPATS1Q496A3 300 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 WIPI1Q5MNZ9 446 aaPredicted RBP3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 SLC6A19Q695T7 634 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 PI16Q6UXB8 463 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 FBF1Q8TES7 1133 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 GPR62Q9BZJ7 368 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 ASCC2Q9H1I8 757 aaPredicted RBP3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 PALD1Q9ULE6 856 aa3.28□□□□□ -1.88
RNU6-561P-201ENST00000516222 HRKO00198 91 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 ABLIM1O14639 778 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 TRIM13O60858 407 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 PAGE1O75459 146 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 PGRP06401 933 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 PLP2Q04941 152 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 SLC14A2Q15849 920 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 CLEC16AQ2KHT3 1053 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 TSPYL5Q86VY4 417 aaPredicted RBP3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 MRPL41Q8IXM3 137 aaKnown RBP3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 C3orf58Q8NDZ4 430 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 ANKRD24Q8TF21 1146 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 SGPP1Q9BX95 441 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 DUSP15Q9H1R2 295 aaPredicted RBP3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 CEP131Q9UPN4 1083 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 SPG7Q9UQ90 795 aa3.27□□□□□ -1.89
RNU6-561P-201ENST00000516222 SSU72P8A0A1W2PR75 194 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 ZC3H12DA2A288 527 aaKnown RBP3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 OTOL1A6NHN0 477 aaPredicted RBP3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 ARID3CA6NKF2 412 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 PSPNO60542 156 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 FBXO24O75426 580 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 IGHA2P01877 340 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 PI3P19957 117 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 ATP2B2Q01814 1243 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 TMEM62Q0P6H9 643 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 ENOX2Q16206 610 aaKnown RBP3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 SKOR2Q2VWA4 1001 aaPredicted RBP3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 GAB4Q2WGN9 574 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 ADGRF1Q5T601 910 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 ALG1LQ6GMV1 187 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 SV2BQ7L1I2 683 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 GGNQ86UU5 652 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 ZDHHC14Q8IZN3 488 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 TEPSINQ96N21 525 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 GPR20Q99678 358 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 XYLT2Q9H1B5 865 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 BIN2Q9UBW5 565 aaPredicted RBP3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 DCTN4Q9UJW0 460 aa3.26□□□□□ -1.89
RNU6-561P-201ENST00000516222 CARNS1A5YM72 827 aa3.25□□□□□ -1.89
RNU6-561P-201ENST00000516222 N4BP3O15049 544 aa3.25□□□□□ -1.89
RNU6-561P-201ENST00000516222 ARL4AP40617 200 aa3.25□□□□□ -1.89
RNU6-561P-201ENST00000516222 TNNI2P48788 182 aa3.25□□□□□ -1.89
RNU6-561P-201ENST00000516222 YARSP54577 528 aaKnown RBP3.25□□□□□ -1.89
RNU6-561P-201ENST00000516222 SSPNQ14714 243 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms