RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 FAM227BQ96M60 508 aa23.15■■□□□ 1.3
LMNA-225ENST00000515824 MKNK2Q9HBH9 465 aa23.15■■□□□ 1.3
LMNA-225ENST00000515824 ZNF287Q9HBT7 754 aa23.15■■□□□ 1.3
LMNA-225ENST00000515824 BCRP11274 1271 aa23.14■■□□□ 1.29
LMNA-225ENST00000515824 AKR1B1P15121 316 aa23.14■■□□□ 1.29
LMNA-225ENST00000515824 SDSP20132 328 aa23.14■■□□□ 1.29
LMNA-225ENST00000515824 HOXA7P31268 230 aaPredicted RBP23.14■■□□□ 1.29
LMNA-225ENST00000515824 KIAA1683Q9H0B3 1180 aa23.14■■□□□ 1.29
LMNA-225ENST00000515824 EMILIN3Q9NT22 766 aa23.14■■□□□ 1.29
LMNA-225ENST00000515824 PTPRFP10586 1907 aa23.14■■□□□ 1.29
LMNA-225ENST00000515824 NMIQ13287 307 aaPredicted RBP23.13■■□□□ 1.29
LMNA-225ENST00000515824 STK11IPQ8N1F8 1099 aa23.13■■□□□ 1.29
LMNA-225ENST00000515824 ACER1Q8TDN7 264 aa23.13■■□□□ 1.29
LMNA-225ENST00000515824 C12orf42Q96LP6 360 aa23.13■■□□□ 1.29
LMNA-225ENST00000515824 ASCC2Q9H1I8 757 aaPredicted RBP23.13■■□□□ 1.29
LMNA-225ENST00000515824 A0A0D9SFI3 127 aa23.12■■□□□ 1.29
LMNA-225ENST00000515824 CCDC85CA6NKD9 419 aa23.12■■□□□ 1.29
LMNA-225ENST00000515824 HIP1O00291 1037 aa23.12■■□□□ 1.29
LMNA-225ENST00000515824 GNRH1P01148 92 aa23.12■■□□□ 1.29
LMNA-225ENST00000515824 SLC3A2P08195 630 aaKnown RBP23.12■■□□□ 1.29
LMNA-225ENST00000515824 GCLCP48506 637 aaPredicted RBP23.12■■□□□ 1.29
LMNA-225ENST00000515824 IRX3P78415 501 aaPredicted RBP23.12■■□□□ 1.29
LMNA-225ENST00000515824 ZYXQ15942 572 aaKnown RBP23.12■■□□□ 1.29
LMNA-225ENST00000515824 ZNF444Q8N0Y2 327 aaPredicted RBP23.11■■□□□ 1.29
LMNA-225ENST00000515824 ARHGEF10LQ9HCE6 1279 aa23.11■■□□□ 1.29
LMNA-225ENST00000515824 HPS5Q9UPZ3 1129 aa23.11■■□□□ 1.29
LMNA-225ENST00000515824 PTPN22Q9Y2R2 807 aa23.11■■□□□ 1.29
LMNA-225ENST00000515824 ROBO3Q96MS0 1386 aa23.11■■□□□ 1.29
LMNA-225ENST00000515824 PSMC4P43686 418 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 MFAP1P55081 439 aaKnown RBP23.1■■□□□ 1.29
LMNA-225ENST00000515824 CAP1Q01518 475 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 ICA1Q05084 483 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 PDE4BQ07343 736 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 PPARAQ07869 468 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 TTC22Q5TAA0 569 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 VPS53Q5VIR6 699 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 ARHGAP39Q9C0H5 1083 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 SH2D4AQ9H788 454 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 KANSL2Q9H9L4 492 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 DIAPH3Q9NSV4 1193 aa23.1■■□□□ 1.29
LMNA-225ENST00000515824 USP17L15C9J2P7 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 USP17L13C9JLJ4 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 USP17L11C9JVI0 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 USP17L18D6R9N7 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 USP17L22D6RA61 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 USP17L17D6RBQ6 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 USP17L19D6RCP7 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 USP17L20D6RJB6 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 ECM2O94769 699 aaPredicted RBP23.09■■□□□ 1.29
LMNA-225ENST00000515824 FMNL1O95466 1100 aaPredicted RBP23.09■■□□□ 1.29
LMNA-225ENST00000515824 HOXD10P28358 340 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 USP17L24Q0WX57 530 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 ANKRD13CQ8N6S4 541 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 LOC285556D6RIA3 1793 aa23.09■■□□□ 1.29
LMNA-225ENST00000515824 CCDC171Q6TFL3 1326 aa23.08■■□□□ 1.29
LMNA-225ENST00000515824 A0A1W2PRG0 241 aa23.08■■□□□ 1.29
LMNA-225ENST00000515824 FOXP2O15409 715 aa23.08■■□□□ 1.29
LMNA-225ENST00000515824 RASA1P20936 1047 aa23.08■■□□□ 1.29
LMNA-225ENST00000515824 FCGRTP55899 365 aa23.08■■□□□ 1.29
LMNA-225ENST00000515824 ALX1Q15699 326 aa23.08■■□□□ 1.29
LMNA-225ENST00000515824 FAM110CQ1W6H9 321 aa23.08■■□□□ 1.29
LMNA-225ENST00000515824 CWC27Q6UX04 472 aaKnown RBP23.08■■□□□ 1.29
LMNA-225ENST00000515824 P2RX7Q99572 595 aaKnown RBP23.08■■□□□ 1.29
LMNA-225ENST00000515824 VCAM1P19320 739 aa23.07■■□□□ 1.28
LMNA-225ENST00000515824 PRMT2P55345 433 aa23.07■■□□□ 1.28
LMNA-225ENST00000515824 HERVK_113P62684 666 aa23.07■■□□□ 1.28
LMNA-225ENST00000515824 CENPQQ7L2Z9 268 aaPredicted RBP23.07■■□□□ 1.28
LMNA-225ENST00000515824 ZNF589Q86UQ0 364 aaPredicted RBP23.07■■□□□ 1.28
LMNA-225ENST00000515824 SIAH1Q8IUQ4 282 aa23.07■■□□□ 1.28
LMNA-225ENST00000515824 TMX2Q9Y320 296 aa23.07■■□□□ 1.28
LMNA-225ENST00000515824 PRDM1O75626 825 aa23.06■■□□□ 1.28
LMNA-225ENST00000515824 FGAP02671 866 aa23.06■■□□□ 1.28
LMNA-225ENST00000515824 HSPD1P10809 573 aaKnown RBP23.06■■□□□ 1.28
LMNA-225ENST00000515824 EEF2P13639 858 aaKnown RBP23.06■■□□□ 1.28
LMNA-225ENST00000515824 GSPT1P15170 499 aaKnown RBP23.06■■□□□ 1.28
LMNA-225ENST00000515824 ATP2B2Q01814 1243 aa23.06■■□□□ 1.28
LMNA-225ENST00000515824 CATSPERGQ6ZRH7 1159 aa23.06■■□□□ 1.28
LMNA-225ENST00000515824 GTF3C2Q8WUA4 911 aaPredicted RBP23.06■■□□□ 1.28
LMNA-225ENST00000515824 TRIM47Q96LD4 638 aa23.06■■□□□ 1.28
LMNA-225ENST00000515824 NEFLP07196 543 aa23.05■■□□□ 1.28
LMNA-225ENST00000515824 CTGFP29279 349 aa23.05■■□□□ 1.28
LMNA-225ENST00000515824 CLEC10AQ8IUN9 316 aa23.05■■□□□ 1.28
LMNA-225ENST00000515824 LPAR1Q92633 364 aa23.05■■□□□ 1.28
LMNA-225ENST00000515824 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.05■■□□□ 1.28
LMNA-225ENST00000515824 RPAP3Q9H6T3 665 aaPredicted RBP23.05■■□□□ 1.28
LMNA-225ENST00000515824 MYH8P13535 1937 aa23.04■■□□□ 1.28
LMNA-225ENST00000515824 VCPKMTQ9H867 229 aa23.04■■□□□ 1.28
LMNA-225ENST00000515824 SRRDQ9UH36 339 aa23.04■■□□□ 1.28
LMNA-225ENST00000515824 ANAPC4Q9UJX5 808 aa23.04■■□□□ 1.28
LMNA-225ENST00000515824 TSPY3P0CV98 308 aa23.03■■□□□ 1.28
LMNA-225ENST00000515824 TSPY8P0CW00 308 aa23.03■■□□□ 1.28
LMNA-225ENST00000515824 MORF4L1Q9UBU8 362 aa23.03■■□□□ 1.28
LMNA-225ENST00000515824 PTCH2Q9Y6C5 1203 aa23.03■■□□□ 1.28
LMNA-225ENST00000515824 TNPO2O14787 897 aaKnown RBP23.02■■□□□ 1.28
LMNA-225ENST00000515824 CTDSPL2Q05D32 466 aa23.02■■□□□ 1.28
LMNA-225ENST00000515824 GPRC5AQ8NFJ5 357 aa23.02■■□□□ 1.28
LMNA-225ENST00000515824 GOPCQ9HD26 462 aa23.02■■□□□ 1.28
LMNA-225ENST00000515824 NYAP2Q9P242 653 aa23.02■■□□□ 1.28
LMNA-225ENST00000515824 ZMYM6O95789 1325 aa23.02■■□□□ 1.28
LMNA-225ENST00000515824 TFAP4Q01664 338 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms