RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ACER1Q8TDN7 264 aa29.41■■■□□ 2.3
SNF8-213ENST00000514929 C12orf42Q96LP6 360 aa29.41■■■□□ 2.3
SNF8-213ENST00000514929 P2RX7Q99572 595 aaKnown RBP29.41■■■□□ 2.3
SNF8-213ENST00000514929 GABRQQ9UN88 632 aa29.41■■■□□ 2.3
SNF8-213ENST00000514929 GRK4P32298 578 aa29.4■■■□□ 2.3
SNF8-213ENST00000514929 HERVK_113P62684 666 aa29.4■■■□□ 2.3
SNF8-213ENST00000514929 COA7Q96BR5 231 aa29.4■■■□□ 2.3
SNF8-213ENST00000514929 FSD1Q9BTV5 496 aa29.4■■■□□ 2.3
SNF8-213ENST00000514929 CTR9Q6PD62 1173 aa29.39■■■□□ 2.3
SNF8-213ENST00000514929 TMEM179Q6ZVK1 233 aa29.39■■■□□ 2.3
SNF8-213ENST00000514929 ARPP21Q9UBL0 812 aaPredicted RBP29.39■■■□□ 2.3
SNF8-213ENST00000514929 SALL3Q9BXA9 1300 aa29.39■■■□□ 2.3
SNF8-213ENST00000514929 RBBP6Q7Z6E9 1792 aaKnown RBP29.39■■■□□ 2.29
SNF8-213ENST00000514929 MYH8P13535 1937 aa29.38■■■□□ 2.29
SNF8-213ENST00000514929 GPAA1O43292 621 aa29.38■■■□□ 2.29
SNF8-213ENST00000514929 CDK8P49336 464 aa29.38■■■□□ 2.29
SNF8-213ENST00000514929 FLT3LGP49771 235 aa29.38■■■□□ 2.29
SNF8-213ENST00000514929 EXOC6Q8TAG9 804 aa29.38■■■□□ 2.29
SNF8-213ENST00000514929 RWDD1Q9H446 243 aaPredicted RBP29.38■■■□□ 2.29
SNF8-213ENST00000514929 MORF4L1Q9UBU8 362 aa29.38■■■□□ 2.29
SNF8-213ENST00000514929 USP17L15C9J2P7 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 USP17L13C9JLJ4 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 USP17L11C9JVI0 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 USP17L18D6R9N7 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 USP17L22D6RA61 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 USP17L17D6RBQ6 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 USP17L19D6RCP7 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 USP17L20D6RJB6 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 SMIM22K7EJ46 135 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 USP17L24Q0WX57 530 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 C16orf86Q6ZW13 317 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 CCDC17Q96LX7 622 aa29.37■■■□□ 2.29
SNF8-213ENST00000514929 BIN2Q9UBW5 565 aaPredicted RBP29.37■■■□□ 2.29
SNF8-213ENST00000514929 GSG1L2A8MUP6 293 aa29.36■■■□□ 2.29
SNF8-213ENST00000514929 M0R2C6 588 aa29.36■■■□□ 2.29
SNF8-213ENST00000514929 GIMAP6Q6P9H5 292 aa29.36■■■□□ 2.29
SNF8-213ENST00000514929 SLAIN1Q8ND83 568 aa29.36■■■□□ 2.29
SNF8-213ENST00000514929 TNRC18O15417 2968 aaPredicted RBP29.36■■■□□ 2.29
SNF8-213ENST00000514929 AKR1B1P15121 316 aa29.35■■■□□ 2.29
SNF8-213ENST00000514929 GNAT2P19087 354 aa29.35■■■□□ 2.29
SNF8-213ENST00000514929 VCAM1P19320 739 aa29.35■■■□□ 2.29
SNF8-213ENST00000514929 EN2P19622 333 aaPredicted RBP29.35■■■□□ 2.29
SNF8-213ENST00000514929 GPRC5AQ8NFJ5 357 aa29.35■■■□□ 2.29
SNF8-213ENST00000514929 GTF3C2Q8WUA4 911 aaPredicted RBP29.35■■■□□ 2.29
SNF8-213ENST00000514929 SUPT16HQ9Y5B9 1047 aaKnown RBP29.35■■■□□ 2.29
SNF8-213ENST00000514929 ADCY3O60266 1144 aa29.34■■■□□ 2.29
SNF8-213ENST00000514929 APPP05067 770 aa29.34■■■□□ 2.29
SNF8-213ENST00000514929 SBK1Q52WX2 424 aa29.34■■■□□ 2.29
SNF8-213ENST00000514929 PAGR1Q9BTK6 254 aa29.34■■■□□ 2.29
SNF8-213ENST00000514929 TXNRD2Q9NNW7 524 aa29.34■■■□□ 2.29
SNF8-213ENST00000514929 STAP2Q9UGK3 403 aa29.34■■■□□ 2.29
SNF8-213ENST00000514929 A0A1W2PRG0 241 aa29.33■■■□□ 2.29
SNF8-213ENST00000514929 PDE1AP54750 535 aa29.33■■■□□ 2.29
SNF8-213ENST00000514929 UBXN2AP68543 259 aa29.33■■■□□ 2.29
SNF8-213ENST00000514929 IRF5Q13568 498 aa29.33■■■□□ 2.29
SNF8-213ENST00000514929 SEC62Q99442 399 aaKnown RBP29.33■■■□□ 2.29
SNF8-213ENST00000514929 LNPKQ9C0E8 428 aa29.33■■■□□ 2.29
SNF8-213ENST00000514929 RBPJLQ9UBG7 517 aa29.33■■■□□ 2.29
SNF8-213ENST00000514929 MINDY4BA8MYZ0 360 aa29.32■■■□□ 2.28
SNF8-213ENST00000514929 PEX10O60683 326 aa29.32■■■□□ 2.28
SNF8-213ENST00000514929 TDO2P48775 406 aa29.32■■■□□ 2.28
SNF8-213ENST00000514929 ICA1Q05084 483 aa29.32■■■□□ 2.28
SNF8-213ENST00000514929 MTFR1Q15390 333 aa29.32■■■□□ 2.28
SNF8-213ENST00000514929 B4GALNT3Q6L9W6 998 aa29.32■■■□□ 2.28
SNF8-213ENST00000514929 CATSPERGQ6ZRH7 1159 aa29.32■■■□□ 2.28
SNF8-213ENST00000514929 RPAP3Q9H6T3 665 aaPredicted RBP29.32■■■□□ 2.28
SNF8-213ENST00000514929 ARHGEF10LQ9HCE6 1279 aa29.32■■■□□ 2.28
SNF8-213ENST00000514929 KIAA0100Q14667 2235 aaKnown RBP29.31■■■□□ 2.28
SNF8-213ENST00000514929 ZMYM1Q5SVZ6 1142 aa29.31■■■□□ 2.28
SNF8-213ENST00000514929 CLEC10AQ8IUN9 316 aa29.31■■■□□ 2.28
SNF8-213ENST00000514929 CCAR1Q8IX12 1150 aaKnown RBP29.31■■■□□ 2.28
SNF8-213ENST00000514929 SMC5Q8IY18 1101 aa29.31■■■□□ 2.28
SNF8-213ENST00000514929 SH2D4AQ9H788 454 aa29.31■■■□□ 2.28
SNF8-213ENST00000514929 ELNP15502 786 aa29.3■■■□□ 2.28
SNF8-213ENST00000514929 ERVK-9P63128 1117 aa29.3■■■□□ 2.28
SNF8-213ENST00000514929 ERVK-24P63145 666 aa29.3■■■□□ 2.28
SNF8-213ENST00000514929 STK11IPQ8N1F8 1099 aa29.3■■■□□ 2.28
SNF8-213ENST00000514929 PXYLP1Q8TE99 480 aa29.3■■■□□ 2.28
SNF8-213ENST00000514929 EVI5LQ96CN4 794 aa29.3■■■□□ 2.28
SNF8-213ENST00000514929 EPB41L4AQ9HCS5 686 aaPredicted RBP29.3■■■□□ 2.28
SNF8-213ENST00000514929 PATL2C9JE40 543 aaKnown RBP29.29■■■□□ 2.28
SNF8-213ENST00000514929 NACAP1Q9BZK3 213 aa29.29■■■□□ 2.28
SNF8-213ENST00000514929 MKNK2Q9HBH9 465 aa29.29■■■□□ 2.28
SNF8-213ENST00000514929 RABGAP1Q9Y3P9 1069 aa29.29■■■□□ 2.28
SNF8-213ENST00000514929 IGHDP01880 384 aa29.28■■■□□ 2.28
SNF8-213ENST00000514929 CCL5P13501 91 aa29.28■■■□□ 2.28
SNF8-213ENST00000514929 TMX2Q9Y320 296 aa29.28■■■□□ 2.28
SNF8-213ENST00000514929 BRCA2P51587 3418 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 DOCK3Q8IZD9 2030 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 MAPK4P31152 587 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 ATP2B2Q01814 1243 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 Q3C1V9 767 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 POTEEQ6S8J3 1075 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 SIAH1Q8IUQ4 282 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 IFNL3Q8IZI9 196 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 TANGO6Q9C0B7 1094 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 RNF208Q9H0X6 261 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 KANSL2Q9H9L4 492 aa29.27■■■□□ 2.28
SNF8-213ENST00000514929 ROBO3Q96MS0 1386 aa29.26■■■□□ 2.28
SNF8-213ENST00000514929 INHAP05111 366 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms