RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
ITGA3-214ENST00000514834 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
ITGA3-214ENST00000514834 ERC2O15083 957 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 GNRH1P01148 92 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 CDK8P49336 464 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 FCGRTP55899 365 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
ITGA3-214ENST00000514834 B4GALNT3Q6L9W6 998 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 EPB41L4AQ9HCS5 686 aaPredicted RBP16.68■□□□□ 0.26
ITGA3-214ENST00000514834 TXNRD2Q9NNW7 524 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 CABP5Q9NP86 173 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 STAP2Q9UGK3 403 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 PNMA3Q9UL41 463 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 MYPNQ86TC9 1320 aa16.68■□□□□ 0.26
ITGA3-214ENST00000514834 MKI67P46013 3256 aaKnown RBP16.67■□□□□ 0.26
ITGA3-214ENST00000514834 GPAA1O43292 621 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 PDE1AP54750 535 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 PABPC4Q13310 644 aaKnown RBP eCLIP16.67■□□□□ 0.26
ITGA3-214ENST00000514834 FAM110CQ1W6H9 321 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 KIAA1755Q5JYT7 1200 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 SMC5Q8IY18 1101 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 STK11IPQ8N1F8 1099 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 FEZ1Q99689 392 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 KIAA1683Q9H0B3 1180 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
ITGA3-214ENST00000514834 ZFYP08048 801 aaPredicted RBP16.66■□□□□ 0.26
ITGA3-214ENST00000514834 EN2P19622 333 aaPredicted RBP16.66■□□□□ 0.26
ITGA3-214ENST00000514834 GCLCP48506 637 aaPredicted RBP16.66■□□□□ 0.26
ITGA3-214ENST00000514834 PRMT2P55345 433 aa16.66■□□□□ 0.26
ITGA3-214ENST00000514834 HERVK_113P62684 666 aa16.66■□□□□ 0.26
ITGA3-214ENST00000514834 IRX3P78415 501 aaPredicted RBP16.66■□□□□ 0.26
ITGA3-214ENST00000514834 MTFR1Q15390 333 aa16.66■□□□□ 0.26
ITGA3-214ENST00000514834 ZMYM1Q5SVZ6 1142 aa16.66■□□□□ 0.26
ITGA3-214ENST00000514834 C16orf86Q6ZW13 317 aa16.66■□□□□ 0.26
ITGA3-214ENST00000514834 C12orf42Q96LP6 360 aa16.66■□□□□ 0.26
ITGA3-214ENST00000514834 FSD1Q9BTV5 496 aa16.66■□□□□ 0.26
ITGA3-214ENST00000514834 RBBP6Q7Z6E9 1792 aaKnown RBP16.66■□□□□ 0.26
ITGA3-214ENST00000514834 TNPO2O14787 897 aaKnown RBP16.65■□□□□ 0.26
ITGA3-214ENST00000514834 VCAM1P19320 739 aa16.65■□□□□ 0.26
ITGA3-214ENST00000514834 HOXD10P28358 340 aa16.65■□□□□ 0.26
ITGA3-214ENST00000514834 FLT3LGP49771 235 aa16.65■□□□□ 0.26
ITGA3-214ENST00000514834 Q3C1V9 767 aa16.65■□□□□ 0.26
ITGA3-214ENST00000514834 CCDC129Q6ZRS4 1044 aa16.65■□□□□ 0.26
ITGA3-214ENST00000514834 RAET1EQ8TD07 263 aa16.65■□□□□ 0.26
ITGA3-214ENST00000514834 MORF4L1Q9UBU8 362 aa16.65■□□□□ 0.26
ITGA3-214ENST00000514834 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
ITGA3-214ENST00000514834 PLXNB2O15031 1838 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 MINDY4BA8MYZ0 360 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 FOXP2O15409 715 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 ELNP15502 786 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 GRK4P32298 578 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 SBK1Q52WX2 424 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 TMEM179Q6ZVK1 233 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
ITGA3-214ENST00000514834 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.25
ITGA3-214ENST00000514834 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
ITGA3-214ENST00000514834 PDE4DIPQ5VU43 2346 aa16.63■□□□□ 0.25
ITGA3-214ENST00000514834 CNMDO75829 334 aa16.63■□□□□ 0.25
ITGA3-214ENST00000514834 CATSPERGQ6ZRH7 1159 aa16.63■□□□□ 0.25
ITGA3-214ENST00000514834 RPAP3Q9H6T3 665 aaPredicted RBP16.63■□□□□ 0.25
ITGA3-214ENST00000514834 GJD2Q9UKL4 321 aa16.63■□□□□ 0.25
ITGA3-214ENST00000514834 RLFQ13129 1914 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 PATL2C9JE40 543 aaKnown RBP16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 ADCY3O60266 1144 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 APPP05067 770 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 RASA1P20936 1047 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP14P54578 494 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 NUCB1Q02818 461 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 GIMAP6Q6P9H5 292 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 IFNL3Q8IZI9 196 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 PAGR1Q9BTK6 254 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 PORCNQ9H237 461 aa16.62■□□□□ 0.25
ITGA3-214ENST00000514834 ARPP21Q9UBL0 812 aaPredicted RBP16.62■□□□□ 0.25
ITGA3-214ENST00000514834 GREB1LQ9C091 1923 aaPredicted RBP16.61■□□□□ 0.25
ITGA3-214ENST00000514834 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
ITGA3-214ENST00000514834 PLEKHM2Q8IWE5 1019 aa16.61■□□□□ 0.25
ITGA3-214ENST00000514834 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
ITGA3-214ENST00000514834 SPICE1Q8N0Z3 855 aa16.61■□□□□ 0.25
ITGA3-214ENST00000514834 GPRC5AQ8NFJ5 357 aa16.61■□□□□ 0.25
ITGA3-214ENST00000514834 CCDC17Q96LX7 622 aa16.61■□□□□ 0.25
ITGA3-214ENST00000514834 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
ITGA3-214ENST00000514834 TAOK2Q9UL54 1235 aa16.61■□□□□ 0.25
ITGA3-214ENST00000514834 PRDM1O75626 825 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 GNAT2P19087 354 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 TDO2P48775 406 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 ERVK-24P63145 666 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms