RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 RGS19P49795 217 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 PRMT2P55345 433 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 BACE1P56817 501 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 IRX3P78415 501 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 ZYXQ15942 572 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 LRRFIP1Q32MZ4 808 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 ANKRD13CQ8N6S4 541 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 RAET1EQ8TD07 263 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 ATP8A2Q9NTI2 1148 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 BIN2Q9UBW5 565 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 BCRP11274 1271 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 CHMLP26374 656 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 CAP1Q01518 475 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 TATDN1Q6P1N9 297 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 USP17L2Q6R6M4 530 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 TRIM47Q96LD4 638 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 SRRDQ9UH36 339 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 MYPNQ86TC9 1320 aa10.47□□□□□ -0.73
PDLIM5-213ENST00000509357 TNPO2O14787 897 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 APPP05067 770 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 ZFYP08048 801 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 SHMT1P34896 483 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 GCLCP48506 637 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 GABPAQ06546 454 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 COL9A3Q14050 684 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 BMP2KLQ5H9B9 411 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 SH3D19Q5HYK7 790 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 CCAR1Q8IX12 1150 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 SLC44A5Q8NCS7 719 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 SH3TC2Q8TF17 1288 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 DYNLL2Q96FJ2 89 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 ASCC2Q9H1I8 757 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 TAF6LQ9Y6J9 622 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 ADGRA2Q96PE1 1338 aa10.46□□□□□ -0.73
PDLIM5-213ENST00000509357 USP17L12C9JPN9 530 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L21D6R901 530 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 CTGFP29279 349 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 USP14P54578 494 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 CTR9Q6PD62 1173 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 CWC27Q6UX04 472 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 COA7Q96BR5 231 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 CWC22Q9HCG8 908 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 INCENPQ9NQS7 918 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 SWAP70Q9UH65 585 aa10.45□□□□□ -0.74
PDLIM5-213ENST00000509357 MINDY4BA8MYZ0 360 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 HSPD1P10809 573 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 TDO2P48775 406 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 PTH1RQ03431 593 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 PRKCZQ05513 592 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 SEPT2Q15019 361 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 FAM110CQ1W6H9 321 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 STK11IPQ8N1F8 1099 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 ZNF333Q96JL9 665 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 P2RX7Q99572 595 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 HELLSQ9NRZ9 838 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 EMILIN3Q9NT22 766 aa10.44□□□□□ -0.74
PDLIM5-213ENST00000509357 ROBO3Q96MS0 1386 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 CCDC171Q6TFL3 1326 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L15C9J2P7 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L13C9JLJ4 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L11C9JVI0 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L18D6R9N7 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L22D6RA61 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L17D6RBQ6 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L19D6RCP7 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L20D6RJB6 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 RAD21O60216 631 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 GNAT2P19087 354 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 HOXA7P31268 230 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 GRK4P32298 578 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 GUCY1A2P33402 732 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 CDK8P49336 464 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 FLT3LGP49771 235 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 HERVK_113P62684 666 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 UBXN2AP68543 259 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 ATP2B2Q01814 1243 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 USP17L24Q0WX57 530 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 MCMDC2Q4G0Z9 681 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 C12orf60Q5U649 245 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 TMEM179Q6ZVK1 233 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 IFNL3Q8IZI9 196 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 GPRC5AQ8NFJ5 357 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 ACER1Q8TDN7 264 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 PAGR1Q9BTK6 254 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 NACAP1Q9BZK3 213 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 MKNK2Q9HBH9 465 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 ARPP21Q9UBL0 812 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 GABRQQ9UN88 632 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 LOC285556D6RIA3 1793 aa10.43□□□□□ -0.74
PDLIM5-213ENST00000509357 POTEFA5A3E0 1075 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 PATL2C9JE40 543 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 SGSM2O43147 1006 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 ADCY3O60266 1144 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 AKR1B1P15121 316 aa10.42□□□□□ -0.74
PDLIM5-213ENST00000509357 CLEC10AQ8IUN9 316 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms