RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 HAUS7Q99871 368 aa16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 CWC22Q9HCG8 908 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 EMILIN3Q9NT22 766 aa16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 GJD2Q9UKL4 321 aa16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 RABGAP1Q9Y3P9 1069 aa16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 MYH7P12883 1935 aa16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 MYH8P13535 1937 aa16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 TCRBV5S4A2TA0A5A2 114 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 FARP2O94887 1054 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 ERVK-9P63128 1117 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 ERVK-24P63145 666 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 JAG1P78504 1218 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 GABPAQ06546 454 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 UBE3CQ15386 1083 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 UBE2Q1Q7Z7E8 422 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 GPATCH3Q96I76 525 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 HMX1Q9NP08 348 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 RPTORQ8N122 1335 aa16.41■□□□□ 0.22
CCHCR1-227ENST00000508852 SHMT1P34896 483 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 ADD2P35612 726 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 RGS2P41220 211 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 PLCD1P51178 756 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 DEFB118Q96PH6 123 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 CRISPLD2Q9H0B8 497 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 BOLA2Q9H3K6 86 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 DCP1AQ9NPI6 582 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 RBPJLQ9UBG7 517 aa16.4■□□□□ 0.22
CCHCR1-227ENST00000508852 LRRFIP1Q32MZ4 808 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-227ENST00000508852 CATSPERGQ6ZRH7 1159 aa16.39■□□□□ 0.21
CCHCR1-227ENST00000508852 TMEM179Q6ZVK1 233 aa16.39■□□□□ 0.21
CCHCR1-227ENST00000508852 PLEKHH3Q7Z736 793 aa16.39■□□□□ 0.21
CCHCR1-227ENST00000508852 CCDC17Q96LX7 622 aa16.39■□□□□ 0.21
CCHCR1-227ENST00000508852 HOXC10Q9NYD6 342 aa16.39■□□□□ 0.21
CCHCR1-227ENST00000508852 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-227ENST00000508852 NECAB2Q7Z6G3 386 aa16.38■□□□□ 0.21
CCHCR1-227ENST00000508852 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
CCHCR1-227ENST00000508852 PAGR1Q9BTK6 254 aa16.38■□□□□ 0.21
CCHCR1-227ENST00000508852 ARHGEF10LQ9HCE6 1279 aa16.38■□□□□ 0.21
CCHCR1-227ENST00000508852 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
CCHCR1-227ENST00000508852 CEP290O15078 2479 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 ZKSCAN1P17029 563 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 VCAM1P19320 739 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 GPR142Q7Z601 462 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 LPAR1Q92633 364 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 BCL11AQ9H165 835 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 TXNRD2Q9NNW7 524 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 ECHDC1Q9NTX5 307 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 IVNS1ABPQ9Y6Y0 642 aa16.37■□□□□ 0.21
CCHCR1-227ENST00000508852 H0YGN5 161 aa16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 MBD4O95243 580 aa16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 CYP2B6P20813 491 aa16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 COG2Q14746 738 aa16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 SHROOM1Q2M3G4 852 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 APBA2Q99767 749 aa16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 DCTPP1Q9H773 170 aa16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
CCHCR1-227ENST00000508852 SLC15A5A6NIM6 579 aa16.35■□□□□ 0.21
CCHCR1-227ENST00000508852 EVI5O60447 810 aa16.35■□□□□ 0.21
CCHCR1-227ENST00000508852 ZFYP08048 801 aaPredicted RBP16.35■□□□□ 0.21
CCHCR1-227ENST00000508852 SEPT2Q15019 361 aa16.35■□□□□ 0.21
CCHCR1-227ENST00000508852 Q3C1V9 767 aa16.35■□□□□ 0.21
CCHCR1-227ENST00000508852 MORN1Q5T089 497 aa16.35■□□□□ 0.21
CCHCR1-227ENST00000508852 USP6NLQ92738 828 aa16.35■□□□□ 0.21
CCHCR1-227ENST00000508852 RPAP3Q9H6T3 665 aaPredicted RBP16.35■□□□□ 0.21
CCHCR1-227ENST00000508852 STRNO43815 780 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 GUCY1A2P33402 732 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 MAP3K21Q5TCX8 1036 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 C12orf60Q5U649 245 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 GIMAP6Q6P9H5 292 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 ACER1Q8TDN7 264 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 TRIB2Q92519 343 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 EDC3Q96F86 508 aaKnown RBP16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 NBPF3Q9H094 633 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 ARPP21Q9UBL0 812 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 BAZ2AQ9UIF9 1905 aaKnown RBP16.34■□□□□ 0.21
CCHCR1-227ENST00000508852 PRKAR2AP13861 404 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 GNAT2P19087 354 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 C20orf194Q5TEA3 1177 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 MFSD14CQ5VZR4 134 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 PORCNQ9H237 461 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 KANSL2Q9H9L4 492 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 ZNF287Q9HBT7 754 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 SLC5A4Q9NY91 659 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 OGDHLQ9ULD0 1010 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 COLQQ9Y215 455 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 TMX2Q9Y320 296 aa16.33■□□□□ 0.2
CCHCR1-227ENST00000508852 A0A1W2PPC1 479 aa16.32■□□□□ 0.2
CCHCR1-227ENST00000508852 SPDYE16A6NNV3 312 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-227ENST00000508852 USP17L12C9JPN9 530 aa16.32■□□□□ 0.2
CCHCR1-227ENST00000508852 USP17L21D6R901 530 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms