RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
PTPN20-220ENST00000508715 TMEM179Q6ZVK1 233 aa12.26□□□□□ -0.45
PTPN20-220ENST00000508715 CYB5R4Q7L1T6 521 aa12.26□□□□□ -0.45
PTPN20-220ENST00000508715 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
PTPN20-220ENST00000508715 WDR18Q9BV38 432 aa12.26□□□□□ -0.45
PTPN20-220ENST00000508715 PICK1Q9NRD5 415 aa12.26□□□□□ -0.45
PTPN20-220ENST00000508715 GINM1Q9NU53 330 aa12.26□□□□□ -0.45
PTPN20-220ENST00000508715 SMCHD1A6NHR9 2005 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 TESPA1A2RU30 521 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 MPHOSPH10O00566 681 aaKnown RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 REC8O95072 547 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 SLC3A2P08195 630 aaKnown RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 RAB3GAP1Q15042 981 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 RRP12Q5JTH9 1297 aaKnown RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 RCSD1Q6JBY9 416 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 PAXIP1Q6ZW49 1069 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 MB21D2Q8IYB1 491 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 ZNF444Q8N0Y2 327 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 ZNF280CQ8ND82 737 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 BRI3BPQ8WY22 251 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 CEP95Q96GE4 821 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 ZSWIM5Q9P217 1185 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 SNX14Q9Y5W7 946 aa12.25□□□□□ -0.45
PTPN20-220ENST00000508715 BAZ2BQ9UIF8 2168 aaKnown RBP12.25□□□□□ -0.45
PTPN20-220ENST00000508715 A0A0G2JLL6 359 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-220ENST00000508715 TRIM75PA6NK02 468 aa12.24□□□□□ -0.45
PTPN20-220ENST00000508715 IGF2BP3O00425 579 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTPN20-220ENST00000508715 EPB41L2O43491 1005 aaKnown RBP12.24□□□□□ -0.45
PTPN20-220ENST00000508715 KDM4AO75164 1064 aa12.24□□□□□ -0.45
PTPN20-220ENST00000508715 PCP11498 1178 aaKnown RBP12.24□□□□□ -0.45
PTPN20-220ENST00000508715 EEF2P13639 858 aaKnown RBP12.24□□□□□ -0.45
PTPN20-220ENST00000508715 SH3D19Q5HYK7 790 aa12.24□□□□□ -0.45
PTPN20-220ENST00000508715 GPAT2Q6NUI2 795 aa12.24□□□□□ -0.45
PTPN20-220ENST00000508715 PRRT2Q7Z6L0 340 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-220ENST00000508715 DOCK3Q8IZD9 2030 aa12.24□□□□□ -0.45
PTPN20-220ENST00000508715 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
PTPN20-220ENST00000508715 CABP5Q9NP86 173 aa12.24□□□□□ -0.45
PTPN20-220ENST00000508715 MTMR4Q9NYA4 1195 aa12.24□□□□□ -0.45
PTPN20-220ENST00000508715 CXCL11O14625 94 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 TSPY3P0CV98 308 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 TSPY8P0CW00 308 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 TM4SF4P48230 202 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 BACE1P56817 501 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 NOGQ13253 232 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 MTMR2Q13614 643 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 CHST3Q7LGC8 479 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 MKL1Q969V6 931 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 ZKSCAN3Q9BRR0 538 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 RNF41Q9H4P4 317 aaPredicted RBP12.23□□□□□ -0.45
PTPN20-220ENST00000508715 KANSL2Q9H9L4 492 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 ZNF287Q9HBT7 754 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
PTPN20-220ENST00000508715 TOMM22Q9NS69 142 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 NYAP2Q9P242 653 aa12.23□□□□□ -0.45
PTPN20-220ENST00000508715 COL11A1P12107 1806 aaPredicted RBP12.23□□□□□ -0.45
PTPN20-220ENST00000508715 CCL15-CCL14A0A0B4J2E2 113 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 TSPY2A6NKD2 308 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 CPA1P15085 419 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 MAP2K2P36507 400 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 HMGCS2P54868 508 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 ICA1Q05084 483 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 SNAPC2Q13487 334 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 SEC23AQ15436 765 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 CCL15Q16663 113 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 TREML2Q5T2D2 321 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 POTEEQ6S8J3 1075 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 RASGRP2Q7LDG7 609 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 ESR2Q92731 530 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 IL17RAQ96F46 866 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 TMX2Q9Y320 296 aa12.22□□□□□ -0.45
PTPN20-220ENST00000508715 MANSC4A6NHS7 340 aaPredicted RBP12.21□□□□□ -0.45
PTPN20-220ENST00000508715 BTBD19C9JJ37 291 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 USP17L10C9JJH3 530 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 GTF2A2P52657 109 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 EXOSC10Q01780 885 aaKnown RBP12.21□□□□□ -0.45
PTPN20-220ENST00000508715 ZYXQ15942 572 aaKnown RBP12.21□□□□□ -0.45
PTPN20-220ENST00000508715 ENAHQ8N8S7 591 aaPredicted RBP12.21□□□□□ -0.45
PTPN20-220ENST00000508715 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 IGDCC4Q8TDY8 1250 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 C12orf42Q96LP6 360 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 TBC1D2Q9BYX2 928 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 KRT23Q9C075 422 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 R3HDMLQ9H3Y0 253 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 AS3MTQ9HBK9 375 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 CLIP2Q9UDT6 1046 aa12.21□□□□□ -0.45
PTPN20-220ENST00000508715 CASP8AP2Q9UKL3 1982 aa12.2□□□□□ -0.46
PTPN20-220ENST00000508715 C19orf81C9J6K1 198 aa12.2□□□□□ -0.46
PTPN20-220ENST00000508715 TTLL1O95922 423 aa12.2□□□□□ -0.46
PTPN20-220ENST00000508715 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
PTPN20-220ENST00000508715 LRRC47Q8N1G4 583 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms