RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 WASH4PA8MWX3 477 aa7□□□□□ -1.29
PDLIM5-211ENST00000508531 RLBP1P12271 317 aa7□□□□□ -1.29
PDLIM5-211ENST00000508531 ZEB1P37275 1124 aaPredicted RBP7□□□□□ -1.29
PDLIM5-211ENST00000508531 ETV3P41162 512 aa7□□□□□ -1.29
PDLIM5-211ENST00000508531 PRR23BQ6ZRT6 265 aa7□□□□□ -1.29
PDLIM5-211ENST00000508531 Q96M66 194 aa7□□□□□ -1.29
PDLIM5-211ENST00000508531 CORINQ9Y5Q5 1042 aa7□□□□□ -1.29
PDLIM5-211ENST00000508531 CTSHP09668 335 aa6.99□□□□□ -1.29
PDLIM5-211ENST00000508531 ST13P50502 369 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-211ENST00000508531 XPCQ01831 940 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-211ENST00000508531 TTC6Q86TZ1 520 aa6.99□□□□□ -1.29
PDLIM5-211ENST00000508531 PHC3Q8NDX5 983 aa6.99□□□□□ -1.29
PDLIM5-211ENST00000508531 DNAJB8Q8NHS0 232 aa6.99□□□□□ -1.29
PDLIM5-211ENST00000508531 NOC4LQ9BVI4 516 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-211ENST00000508531 ADAM30Q9UKF2 790 aa6.99□□□□□ -1.29
PDLIM5-211ENST00000508531 UPK3BL1B0FP48 263 aa6.98□□□□□ -1.29
PDLIM5-211ENST00000508531 UPK3BL2E5RIL1 263 aa6.98□□□□□ -1.29
PDLIM5-211ENST00000508531 ESR1P03372 595 aa6.98□□□□□ -1.29
PDLIM5-211ENST00000508531 PLCG1P19174 1290 aa6.98□□□□□ -1.29
PDLIM5-211ENST00000508531 RALGPS1Q5JS13 557 aa6.98□□□□□ -1.29
PDLIM5-211ENST00000508531 BNC2Q6ZN30 1099 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-211ENST00000508531 PIWIL2Q8TC59 973 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-211ENST00000508531 USP31Q70CQ4 1352 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 DNAJC25-GNG10A0A024R161 153 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 LCE1DQ5T752 114 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 DNAJC14Q6Y2X3 702 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 TMPRSS7Q7RTY8 843 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 TMC4Q7Z404 712 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 CREG2Q8IUH2 290 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 FAM13CQ8NE31 585 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 PPP1R13LQ8WUF5 828 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 CCDC120Q96HB5 630 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 CEP131Q9UPN4 1083 aa6.97□□□□□ -1.29
PDLIM5-211ENST00000508531 BPNT1O95861 308 aa6.96□□□□□ -1.3
PDLIM5-211ENST00000508531 TPP2P29144 1249 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-211ENST00000508531 ERVFC1P60507 584 aa6.96□□□□□ -1.3
PDLIM5-211ENST00000508531 SYDE1Q6ZW31 735 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-211ENST00000508531 DIRC2Q96SL1 478 aa6.96□□□□□ -1.3
PDLIM5-211ENST00000508531 DUSP15Q9H1R2 295 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-211ENST00000508531 TMEM59LQ9UK28 342 aa6.96□□□□□ -1.3
PDLIM5-211ENST00000508531 CILPO75339 1184 aa6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 F13A1P00488 732 aa6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 PF4P02776 101 aa6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 RAP1GAPP47736 663 aa6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 HK2P52789 917 aa6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 LMNB2Q03252 620 aa6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 CAMK2GQ13555 558 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 DIEXFQ68CQ4 756 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 BHLHE22Q8NFJ8 381 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 ABHD4Q8TB40 342 aa6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 CYB5D2Q8WUJ1 264 aa6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 TRIT1Q9H3H1 467 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 NSUN3Q9H649 340 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-211ENST00000508531 FAM221AA4D161 298 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 RAC2P15153 192 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 YARSP54577 528 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 TAGLNQ01995 201 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 SPOCD1Q6ZMY3 1216 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 FBXO33Q7Z6M2 555 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 CCDC84Q86UT8 332 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 DTWD2Q8NBA8 298 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 GATAD2BQ8WXI9 593 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 PPP1R16BQ96T49 567 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 ADAMTS10Q9H324 1103 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 SMARCA2P51531 1590 aa6.94□□□□□ -1.3
PDLIM5-211ENST00000508531 SORBS3O60504 671 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 LRRN2O75325 713 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 PDIA4P13667 645 aaKnown RBP6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 TMEM201Q5SNT2 666 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 CYB5RLQ6IPT4 315 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 CRELD1Q96HD1 420 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 RHOVQ96L33 236 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 KCNK12Q9HB15 430 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 GPATCH2Q9NW75 528 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 DUSP13Q9UII6 198 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 KCNH3Q9ULD8 1083 aa6.93□□□□□ -1.3
PDLIM5-211ENST00000508531 THOC2Q8NI27 1593 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 GRIN3BO60391 1043 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 TSPAN15O95858 294 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 SRFP11831 508 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 EGR3Q06889 387 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 GAB4Q2WGN9 574 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 CILP2Q8IUL8 1156 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 RELL1Q8IUW5 271 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 FBXO15Q8NCQ5 510 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 MYLIPQ8WY64 445 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 TMEM74Q96NL1 305 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 GPR62Q9BZJ7 368 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 MRS2Q9HD23 443 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 REV1Q9UBZ9 1251 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 VTI1BQ9UEU0 232 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 KLHL3Q9UH77 587 aa6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 POLR3KQ9Y2Y1 108 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-211ENST00000508531 CHURC1-FNTBB4DL54 471 aa6.91□□□□□ -1.3
PDLIM5-211ENST00000508531 HPXP02790 462 aa6.91□□□□□ -1.3
PDLIM5-211ENST00000508531 TRHRP34981 398 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-211ENST00000508531 TNNI2P48788 182 aa6.91□□□□□ -1.3
PDLIM5-211ENST00000508531 FBLN7Q53RD9 439 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms