RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 CAP1Q01518 475 aa18■□□□□ 0.47
TRIO-211ENST00000508343 MCMDC2Q4G0Z9 681 aa18■□□□□ 0.47
TRIO-211ENST00000508343 ACER1Q8TDN7 264 aa18■□□□□ 0.47
TRIO-211ENST00000508343 FEZ1Q99689 392 aa18■□□□□ 0.47
TRIO-211ENST00000508343 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
TRIO-211ENST00000508343 CCDC85CA6NKD9 419 aa17.99■□□□□ 0.47
TRIO-211ENST00000508343 USP14P54578 494 aa17.99■□□□□ 0.47
TRIO-211ENST00000508343 CCDC129Q6ZRS4 1044 aa17.99■□□□□ 0.47
TRIO-211ENST00000508343 C12orf42Q96LP6 360 aa17.99■□□□□ 0.47
TRIO-211ENST00000508343 FAM227BQ96M60 508 aa17.99■□□□□ 0.47
TRIO-211ENST00000508343 ASCC2Q9H1I8 757 aaPredicted RBP17.99■□□□□ 0.47
TRIO-211ENST00000508343 HPS5Q9UPZ3 1129 aa17.99■□□□□ 0.47
TRIO-211ENST00000508343 PTPN22Q9Y2R2 807 aa17.99■□□□□ 0.47
TRIO-211ENST00000508343 GNRH1P01148 92 aa17.98■□□□□ 0.47
TRIO-211ENST00000508343 SDSP20132 328 aa17.98■□□□□ 0.47
TRIO-211ENST00000508343 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
TRIO-211ENST00000508343 ZYXQ15942 572 aaKnown RBP17.98■□□□□ 0.47
TRIO-211ENST00000508343 ARHGAP39Q9C0H5 1083 aa17.98■□□□□ 0.47
TRIO-211ENST00000508343 NAPBQ9H115 298 aa17.98■□□□□ 0.47
TRIO-211ENST00000508343 MKNK2Q9HBH9 465 aa17.98■□□□□ 0.47
TRIO-211ENST00000508343 ZNF287Q9HBT7 754 aa17.98■□□□□ 0.47
TRIO-211ENST00000508343 LOC285556D6RIA3 1793 aa17.98■□□□□ 0.47
TRIO-211ENST00000508343 ROBO3Q96MS0 1386 aa17.97■□□□□ 0.47
TRIO-211ENST00000508343 A0A0D9SFI3 127 aa17.97■□□□□ 0.47
TRIO-211ENST00000508343 PSMC4P43686 418 aa17.97■□□□□ 0.47
TRIO-211ENST00000508343 GCLCP48506 637 aaPredicted RBP17.97■□□□□ 0.47
TRIO-211ENST00000508343 IRX3P78415 501 aaPredicted RBP17.97■□□□□ 0.47
TRIO-211ENST00000508343 STK11IPQ8N1F8 1099 aa17.97■□□□□ 0.47
TRIO-211ENST00000508343 A0A1W2PRG0 241 aa17.96■□□□□ 0.47
TRIO-211ENST00000508343 FOXP2O15409 715 aa17.96■□□□□ 0.47
TRIO-211ENST00000508343 FMNL1O95466 1100 aaPredicted RBP17.96■□□□□ 0.47
TRIO-211ENST00000508343 SIAH1Q8IUQ4 282 aa17.96■□□□□ 0.47
TRIO-211ENST00000508343 ANKRD13CQ8N6S4 541 aa17.96■□□□□ 0.47
TRIO-211ENST00000508343 P2RX7Q99572 595 aaKnown RBP17.96■□□□□ 0.47
TRIO-211ENST00000508343 KANSL2Q9H9L4 492 aa17.96■□□□□ 0.47
TRIO-211ENST00000508343 ARHGEF10LQ9HCE6 1279 aa17.96■□□□□ 0.47
TRIO-211ENST00000508343 USP17L15C9J2P7 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 USP17L13C9JLJ4 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 USP17L11C9JVI0 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 USP17L18D6R9N7 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 USP17L22D6RA61 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 USP17L17D6RBQ6 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 USP17L19D6RCP7 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 USP17L20D6RJB6 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 HIP1O00291 1037 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 ECM2O94769 699 aaPredicted RBP17.95■□□□□ 0.46
TRIO-211ENST00000508343 SLC3A2P08195 630 aaKnown RBP17.95■□□□□ 0.46
TRIO-211ENST00000508343 RASA1P20936 1047 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 HOXD10P28358 340 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 CTGFP29279 349 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 PRMT2P55345 433 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 ICA1Q05084 483 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 USP17L24Q0WX57 530 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 ALX1Q15699 326 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 VPS53Q5VIR6 699 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 ZNF444Q8N0Y2 327 aaPredicted RBP17.95■□□□□ 0.46
TRIO-211ENST00000508343 TRIM47Q96LD4 638 aa17.95■□□□□ 0.46
TRIO-211ENST00000508343 VCAM1P19320 739 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 FCGRTP55899 365 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 HERVK_113P62684 666 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 PDE4BQ07343 736 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 PPARAQ07869 468 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 FAM110CQ1W6H9 321 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 TTC22Q5TAA0 569 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 CATSPERGQ6ZRH7 1159 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRIO-211ENST00000508343 SH2D4AQ9H788 454 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 TMX2Q9Y320 296 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 MYH8P13535 1937 aa17.94■□□□□ 0.46
TRIO-211ENST00000508343 PRDM1O75626 825 aa17.93■□□□□ 0.46
TRIO-211ENST00000508343 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
TRIO-211ENST00000508343 EEF2P13639 858 aaKnown RBP17.93■□□□□ 0.46
TRIO-211ENST00000508343 MFAP1P55081 439 aaKnown RBP17.93■□□□□ 0.46
TRIO-211ENST00000508343 ZNF589Q86UQ0 364 aaPredicted RBP17.93■□□□□ 0.46
TRIO-211ENST00000508343 CLEC10AQ8IUN9 316 aa17.93■□□□□ 0.46
TRIO-211ENST00000508343 GTF3C2Q8WUA4 911 aaPredicted RBP17.93■□□□□ 0.46
TRIO-211ENST00000508343 DIAPH3Q9NSV4 1193 aa17.93■□□□□ 0.46
TRIO-211ENST00000508343 SRRDQ9UH36 339 aa17.93■□□□□ 0.46
TRIO-211ENST00000508343 CCDC171Q6TFL3 1326 aa17.93■□□□□ 0.46
TRIO-211ENST00000508343 FGAP02671 866 aa17.92■□□□□ 0.46
TRIO-211ENST00000508343 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
TRIO-211ENST00000508343 ATP2B2Q01814 1243 aa17.92■□□□□ 0.46
TRIO-211ENST00000508343 CWC27Q6UX04 472 aaKnown RBP17.92■□□□□ 0.46
TRIO-211ENST00000508343 LPAR1Q92633 364 aa17.92■□□□□ 0.46
TRIO-211ENST00000508343 RPAP3Q9H6T3 665 aaPredicted RBP17.92■□□□□ 0.46
TRIO-211ENST00000508343 MORF4L1Q9UBU8 362 aa17.92■□□□□ 0.46
TRIO-211ENST00000508343 ANAPC4Q9UJX5 808 aa17.92■□□□□ 0.46
TRIO-211ENST00000508343 PTCH2Q9Y6C5 1203 aa17.92■□□□□ 0.46
TRIO-211ENST00000508343 CENPQQ7L2Z9 268 aaPredicted RBP17.91■□□□□ 0.46
TRIO-211ENST00000508343 GPRC5AQ8NFJ5 357 aa17.91■□□□□ 0.46
TRIO-211ENST00000508343 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
TRIO-211ENST00000508343 RBPJLQ9UBG7 517 aa17.91■□□□□ 0.46
TRIO-211ENST00000508343 TNPO2O14787 897 aaKnown RBP17.9■□□□□ 0.46
TRIO-211ENST00000508343 CTDSPL2Q05D32 466 aa17.9■□□□□ 0.46
TRIO-211ENST00000508343 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
TRIO-211ENST00000508343 TXNRD2Q9NNW7 524 aa17.9■□□□□ 0.46
TRIO-211ENST00000508343 NYAP2Q9P242 653 aa17.9■□□□□ 0.46
TRIO-211ENST00000508343 ZMYM6O95789 1325 aa17.9■□□□□ 0.46
TRIO-211ENST00000508343 IGKV6D-41A0A0C4DH26 115 aa17.89■□□□□ 0.45
TRIO-211ENST00000508343 TSPY3P0CV98 308 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms