RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 INHBEP58166 350 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 NOGQ13253 232 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 SPRYD7Q5W111 196 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 FEZ1Q99689 392 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 INCENPQ9NQS7 918 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 NYAP2Q9P242 653 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 SNX14Q9Y5W7 946 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 SEC24BO95487 1268 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 SLC10A3P09131 477 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 SNAPC2Q13487 334 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 RASAL3Q86YV0 1011 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 TMTC2Q8N394 836 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 IL27Q8NEV9 243 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 C22orf23Q9BZE7 217 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 MTMR4Q9NYA4 1195 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 ZSWIM5Q9P217 1185 aa23.63■■□□□ 1.37
USP53-203ENST00000507597 MANSC4A6NHS7 340 aaPredicted RBP23.62■■□□□ 1.37
USP53-203ENST00000507597 ATP2B2Q01814 1243 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 BLOC1S2Q6QNY1 142 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 FASTKD5Q7L8L6 764 aaKnown RBP23.62■■□□□ 1.37
USP53-203ENST00000507597 DGKHQ86XP1 1220 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 TMEM87BQ96K49 555 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 TM6SF1Q9BZW5 370 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 TMOD4Q9NZQ9 345 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 STX8Q9UNK0 236 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 AFG3L2Q9Y4W6 797 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 MYH8P13535 1937 aa23.62■■□□□ 1.37
USP53-203ENST00000507597 CETPP11597 493 aa23.61■■□□□ 1.37
USP53-203ENST00000507597 SREBF2Q12772 1141 aa23.61■■□□□ 1.37
USP53-203ENST00000507597 SPP2Q13103 211 aa23.61■■□□□ 1.37
USP53-203ENST00000507597 DHX32Q7L7V1 743 aaKnown RBP23.61■■□□□ 1.37
USP53-203ENST00000507597 RASEFQ8IZ41 740 aa23.61■■□□□ 1.37
USP53-203ENST00000507597 CEP95Q96GE4 821 aa23.61■■□□□ 1.37
USP53-203ENST00000507597 CAPNS2Q96L46 248 aa23.61■■□□□ 1.37
USP53-203ENST00000507597 JAKMIP1Q96N16 626 aaKnown RBP23.61■■□□□ 1.37
USP53-203ENST00000507597 ZSCAN10Q96SZ4 725 aaPredicted RBP23.61■■□□□ 1.37
USP53-203ENST00000507597 GOPCQ9HD26 462 aa23.61■■□□□ 1.37
USP53-203ENST00000507597 DOCK1Q14185 1865 aa23.61■■□□□ 1.37
USP53-203ENST00000507597 WDR19Q8NEZ3 1342 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 IGKV6D-41A0A0C4DH26 115 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 GUCY1A2P33402 732 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 BACE1P56817 501 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 FGD1P98174 961 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 OTUD7BQ6GQQ9 843 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 CYP4F22Q6NT55 531 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 USP17L2Q6R6M4 530 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 KIAA1683Q9H0B3 1180 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 CLIP2Q9UDT6 1046 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 KCNH4Q9UQ05 1017 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 TACC3Q9Y6A5 838 aa23.6■■□□□ 1.37
USP53-203ENST00000507597 TRIM75PA6NK02 468 aa23.59■■□□□ 1.37
USP53-203ENST00000507597 IFIT3O14879 490 aaKnown RBP23.59■■□□□ 1.37
USP53-203ENST00000507597 IRF6O14896 467 aa23.59■■□□□ 1.37
USP53-203ENST00000507597 EEF2P13639 858 aaKnown RBP23.59■■□□□ 1.37
USP53-203ENST00000507597 MAP2K2P36507 400 aa23.59■■□□□ 1.37
USP53-203ENST00000507597 GRM1Q13255 1194 aa23.59■■□□□ 1.37
USP53-203ENST00000507597 STOX1Q6ZVD7 989 aa23.59■■□□□ 1.37
USP53-203ENST00000507597 MB21D2Q8IYB1 491 aaPredicted RBP23.59■■□□□ 1.37
USP53-203ENST00000507597 MKL1Q969V6 931 aa23.59■■□□□ 1.37
USP53-203ENST00000507597 TMX2Q9Y320 296 aa23.59■■□□□ 1.37
USP53-203ENST00000507597 CYP46A1Q9Y6A2 500 aa23.59■■□□□ 1.37
USP53-203ENST00000507597 PRC1O43663 620 aa23.58■■□□□ 1.37
USP53-203ENST00000507597 TOP1P11387 765 aaKnown RBP23.58■■□□□ 1.37
USP53-203ENST00000507597 JAG1P78504 1218 aa23.58■■□□□ 1.37
USP53-203ENST00000507597 PABPC4Q13310 644 aaKnown RBP eCLIP23.58■■□□□ 1.37
USP53-203ENST00000507597 IFIT1BQ5T764 474 aaKnown RBP23.58■■□□□ 1.37
USP53-203ENST00000507597 LPAR1Q92633 364 aa23.58■■□□□ 1.37
USP53-203ENST00000507597 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.58■■□□□ 1.37
USP53-203ENST00000507597 KAT14Q9H8E8 782 aa23.58■■□□□ 1.37
USP53-203ENST00000507597 TNKSO95271 1327 aa23.58■■□□□ 1.36
USP53-203ENST00000507597 WDR33Q9C0J8 1336 aaKnown RBP23.58■■□□□ 1.36
USP53-203ENST00000507597 CASTP20810 708 aaKnown RBP23.57■■□□□ 1.36
USP53-203ENST00000507597 RBM25P49756 843 aaKnown RBP23.57■■□□□ 1.36
USP53-203ENST00000507597 WTAPQ15007 396 aa23.57■■□□□ 1.36
USP53-203ENST00000507597 TMEM67Q5HYA8 995 aa23.57■■□□□ 1.36
USP53-203ENST00000507597 SH3D19Q5HYK7 790 aa23.57■■□□□ 1.36
USP53-203ENST00000507597 PROCA1Q8NCQ7 364 aaPredicted RBP23.57■■□□□ 1.36
USP53-203ENST00000507597 IL17RBQ9NRM6 502 aa23.57■■□□□ 1.36
USP53-203ENST00000507597 MTMR2Q13614 643 aa23.56■■□□□ 1.36
USP53-203ENST00000507597 ADCK5Q3MIX3 580 aa23.56■■□□□ 1.36
USP53-203ENST00000507597 CYB5R4Q7L1T6 521 aa23.56■■□□□ 1.36
USP53-203ENST00000507597 CNKSR2Q8WXI2 1034 aa23.56■■□□□ 1.36
USP53-203ENST00000507597 ANKS1AQ92625 1134 aa23.56■■□□□ 1.36
USP53-203ENST00000507597 ZKSCAN3Q9BRR0 538 aa23.56■■□□□ 1.36
USP53-203ENST00000507597 TAF6LQ9Y6J9 622 aa23.56■■□□□ 1.36
USP53-203ENST00000507597 OTOFQ9HC10 1997 aa23.56■■□□□ 1.36
USP53-203ENST00000507597 ATAD5Q96QE3 1844 aa23.55■■□□□ 1.36
USP53-203ENST00000507597 A0A0G2JLL6 359 aaPredicted RBP23.55■■□□□ 1.36
USP53-203ENST00000507597 FAM155AB1AL88 458 aaPredicted RBP23.55■■□□□ 1.36
USP53-203ENST00000507597 NOVP48745 357 aa23.55■■□□□ 1.36
USP53-203ENST00000507597 MKRN3Q13064 507 aaKnown RBP23.55■■□□□ 1.36
USP53-203ENST00000507597 SHROOM1Q2M3G4 852 aaPredicted RBP23.55■■□□□ 1.36
USP53-203ENST00000507597 SYNE3Q6ZMZ3 975 aa23.55■■□□□ 1.36
USP53-203ENST00000507597 RUFY3Q7L099 469 aa23.55■■□□□ 1.36
USP53-203ENST00000507597 PRRT2Q7Z6L0 340 aaPredicted RBP23.55■■□□□ 1.36
USP53-203ENST00000507597 CCDC84Q86UT8 332 aaPredicted RBP23.55■■□□□ 1.36
USP53-203ENST00000507597 IL17RAQ96F46 866 aa23.55■■□□□ 1.36
USP53-203ENST00000507597 VCPKMTQ9H867 229 aa23.55■■□□□ 1.36
USP53-203ENST00000507597 ZSWIM6Q9HCJ5 1215 aa23.55■■□□□ 1.36
USP53-203ENST00000507597 CCL15-CCL14A0A0B4J2E2 113 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms