RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 NDUFB9Q9Y6M9 179 aa16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 EYSQ5T1H1 3165 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 MAST2Q6P0Q8 1798 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 C19orf81C9J6K1 198 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 USP17L10C9JJH3 530 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 MAPK4P31152 587 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 HOXA7P31268 230 aaPredicted RBP16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 RGS2P41220 211 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 PORCNQ9H237 461 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 GINM1Q9NU53 330 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
POLR2J3-212ENST00000507355 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.21
POLR2J3-212ENST00000507355 POTEB2H3BUK9 544 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 ERVK-9P63128 1117 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 ERVK-24P63145 666 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 GPR142Q7Z601 462 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 PANK1Q8TE04 598 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 APBA2Q99767 749 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 ZBTB21Q9ULJ3 1066 aa16.33■□□□□ 0.2
POLR2J3-212ENST00000507355 SPTBN5Q9NRC6 3674 aaKnown RBP16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 USP5P45974 858 aa16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 Q3C1V9 767 aa16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 MORN1Q5T089 497 aa16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 ZNF697Q5TEC3 545 aa16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 AACSQ86V21 672 aa16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 USP6NLQ92738 828 aa16.32■□□□□ 0.2
POLR2J3-212ENST00000507355 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
POLR2J3-212ENST00000507355 WDR78Q5VTH9 848 aa16.31■□□□□ 0.2
POLR2J3-212ENST00000507355 FAM109BQ6ICB4 259 aaPredicted RBP16.31■□□□□ 0.2
POLR2J3-212ENST00000507355 CERS3Q8IU89 383 aa16.31■□□□□ 0.2
POLR2J3-212ENST00000507355 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
POLR2J3-212ENST00000507355 EMILIN3Q9NT22 766 aa16.31■□□□□ 0.2
POLR2J3-212ENST00000507355 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
POLR2J3-212ENST00000507355 GH2P01242 217 aa16.3■□□□□ 0.2
POLR2J3-212ENST00000507355 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
POLR2J3-212ENST00000507355 IL1RAPL2Q9NP60 686 aa16.3■□□□□ 0.2
POLR2J3-212ENST00000507355 LTBP2Q14767 1821 aa16.3■□□□□ 0.2
POLR2J3-212ENST00000507355 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
POLR2J3-212ENST00000507355 TTC28Q96AY4 2481 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 MYH1P12882 1939 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 CNGA1P29973 690 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 TATDN1Q6P1N9 297 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 POTEEQ6S8J3 1075 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 RHPN1Q8TCX5 695 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 FLRT1Q9NZU1 646 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 PRKAG2Q9UGJ0 569 aa16.29■□□□□ 0.2
POLR2J3-212ENST00000507355 HSP90AB4PQ58FF6 505 aa16.28■□□□□ 0.2
POLR2J3-212ENST00000507355 MFSD14CQ5VZR4 134 aa16.28■□□□□ 0.2
POLR2J3-212ENST00000507355 GTF3C2Q8WUA4 911 aaPredicted RBP16.28■□□□□ 0.2
POLR2J3-212ENST00000507355 CDX2Q99626 313 aaPredicted RBP16.28■□□□□ 0.2
POLR2J3-212ENST00000507355 DDX20Q9UHI6 824 aaKnown RBP16.28■□□□□ 0.2
POLR2J3-212ENST00000507355 SERPINB13Q9UIV8 391 aa16.28■□□□□ 0.2
POLR2J3-212ENST00000507355 ZBED9Q6R2W3 1325 aa16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 PLCD1P51178 756 aa16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 RTP1P59025 263 aa16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 CERKLQ49MI3 558 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 MAFAQ8NHW3 353 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 EDC3Q96F86 508 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 FEZ1Q99689 392 aa16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 RIOK1Q9BRS2 568 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 EHD4Q9H223 541 aa16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 PRDM5Q9NQX1 630 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
POLR2J3-212ENST00000507355 MAGEB6P1A0A0J9YX57 407 aa16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 APBB1O00213 710 aa16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 CNMDO75829 334 aa16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 GLRX3O76003 335 aaKnown RBP16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 MS4A1P11836 297 aa16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 TTF1Q15361 905 aaPredicted RBP16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 ABCB5Q2M3G0 1257 aa16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 BCL11AQ9H165 835 aa16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 CABP5Q9NP86 173 aa16.26■□□□□ 0.19
POLR2J3-212ENST00000507355 CDH23Q9H251 3354 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L15C9J2P7 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L13C9JLJ4 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L11C9JVI0 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L18D6R9N7 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L22D6RA61 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L17D6RBQ6 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L19D6RCP7 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L20D6RJB6 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 DNM1LO00429 736 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms