RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 RUFY3Q7L099 469 aa13.18□□□□□ -0.3
TRIM23-205ENST00000506400 DGKHQ86XP1 1220 aa13.18□□□□□ -0.3
TRIM23-205ENST00000506400 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
TRIM23-205ENST00000506400 ZSCAN10Q96SZ4 725 aaPredicted RBP13.18□□□□□ -0.3
TRIM23-205ENST00000506400 ARHGEF10LQ9HCE6 1279 aa13.18□□□□□ -0.3
TRIM23-205ENST00000506400 NYAP2Q9P242 653 aa13.18□□□□□ -0.3
TRIM23-205ENST00000506400 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 IFIT3O14879 490 aaKnown RBP13.17□□□□□ -0.3
TRIM23-205ENST00000506400 TTLL1O95922 423 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 NOVP48745 357 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 ICA1Q05084 483 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 PPATQ06203 517 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 SAPCD2Q86UD0 394 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 CEP95Q96GE4 821 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 HHIPL1Q96JK4 782 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 ZKSCAN3Q9BRR0 538 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 ELP3Q9H9T3 547 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
TRIM23-205ENST00000506400 SYNPO2Q9UMS6 1093 aa13.17□□□□□ -0.3
TRIM23-205ENST00000506400 TNKSO95271 1327 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
TRIM23-205ENST00000506400 ANTXR2P58335 489 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 WTAPQ15007 396 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 RABEP1Q15276 862 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-205ENST00000506400 TMEM67Q5HYA8 995 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 RGMBQ6NW40 437 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 ANKS1AQ92625 1134 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 CLMNQ96JQ2 1002 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 KIF2CQ99661 725 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
TRIM23-205ENST00000506400 TRPM7Q96QT4 1865 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 NMT2O60551 498 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 LIFRP42702 1097 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 FGD1P98174 961 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 PPIL2Q13356 520 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 SEC23AQ15436 765 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
TRIM23-205ENST00000506400 CHST3Q7LGC8 479 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 ENAHQ8N8S7 591 aaPredicted RBP13.15□□□□□ -0.3
TRIM23-205ENST00000506400 ZNF280CQ8ND82 737 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 MKL1Q969V6 931 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 OPTNQ96CV9 577 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 UPF3BQ9BZI7 483 aaKnown RBP13.15□□□□□ -0.3
TRIM23-205ENST00000506400 ALDH8A1Q9H2A2 487 aaPredicted RBP13.15□□□□□ -0.3
TRIM23-205ENST00000506400 KAT14Q9H8E8 782 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
TRIM23-205ENST00000506400 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
TRIM23-205ENST00000506400 DOCK1Q14185 1865 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 C19orf81C9J6K1 198 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 USP17L10C9JJH3 530 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
TRIM23-205ENST00000506400 CXCL11O14625 94 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 ZBTB48P10074 688 aaPredicted RBP13.14□□□□□ -0.31
TRIM23-205ENST00000506400 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
TRIM23-205ENST00000506400 CPA1P15085 419 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
TRIM23-205ENST00000506400 NEK4P51957 841 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 SPP2Q13103 211 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 ANKRD1Q15327 319 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 Q6ZUG5 572 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 CCDC84Q86UT8 332 aaPredicted RBP13.14□□□□□ -0.31
TRIM23-205ENST00000506400 SIAH1Q8IUQ4 282 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 CCDC102AQ96A19 550 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 WNK4Q96J92 1243 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 FEZ1Q99689 392 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.14□□□□□ -0.31
TRIM23-205ENST00000506400 AFG3L2Q9Y4W6 797 aa13.14□□□□□ -0.31
TRIM23-205ENST00000506400 CCDC69A6NI79 296 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 USP14P54578 494 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 BACE1P56817 501 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 C1QTNF8P60827 252 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
TRIM23-205ENST00000506400 DEFB115Q30KQ5 88 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 SPRYD7Q5W111 196 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 SGMS1Q86VZ5 419 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 CLEC10AQ8IUN9 316 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 ACER1Q8TDN7 264 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 TCEANC2Q96MN5 208 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 LRRC2Q9BYS8 371 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 AGXT2Q9BYV1 514 aa13.13□□□□□ -0.31
TRIM23-205ENST00000506400 LY9Q9HBG7 655 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms