RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.5□□□□□ -0.25
CTTN-208ENST00000498223 ERICH2A1L162 156 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 UNCXA6NJT0 531 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 FAM155AB1AL88 458 aaPredicted RBP13.49□□□□□ -0.25
CTTN-208ENST00000498223 FGRP09769 529 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 FGD1P98174 961 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 CCDC84Q86UT8 332 aaPredicted RBP13.49□□□□□ -0.25
CTTN-208ENST00000498223 ERO1BQ86YB8 467 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 NEDD1Q8NHV4 660 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 ZSWIM5Q9P217 1185 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 TSKSQ9UJT2 592 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 SNCAIPQ9Y6H5 919 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 ZHX2Q9Y6X8 837 aa13.49□□□□□ -0.25
CTTN-208ENST00000498223 PTPRAP18433 802 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 MCM5P33992 734 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 JAG1P78504 1218 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 ICA1Q05084 483 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
CTTN-208ENST00000498223 SART3Q15020 963 aaKnown RBP13.48□□□□□ -0.25
CTTN-208ENST00000498223 ADCK5Q3MIX3 580 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 BLOC1S2Q6QNY1 142 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 CHST3Q7LGC8 479 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 ZIC5Q96T25 663 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 FEZ1Q99689 392 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 KANSL2Q9H9L4 492 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
CTTN-208ENST00000498223 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 IFIT3O14879 490 aaKnown RBP13.47□□□□□ -0.25
CTTN-208ENST00000498223 PRC1O43663 620 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 RAD21O60216 631 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 NMT2O60551 498 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 SLC10A3P09131 477 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 HMGB1P09429 215 aaKnown RBP13.47□□□□□ -0.25
CTTN-208ENST00000498223 CASTP20810 708 aaKnown RBP13.47□□□□□ -0.25
CTTN-208ENST00000498223 NT5C2P49902 561 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 ANAPC15P60006 121 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 TSGA10IPQ3SY00 556 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 CYB5R4Q7L1T6 521 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 CLEC10AQ8IUN9 316 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 KCNB2Q92953 911 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 ABHD8Q96I13 439 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 WNK4Q96J92 1243 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 CLIP2Q9UDT6 1046 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 STX8Q9UNK0 236 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 CYP46A1Q9Y6A2 500 aa13.47□□□□□ -0.25
CTTN-208ENST00000498223 SPDYE5A6NIY4 337 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 EEF2P13639 858 aaKnown RBP13.46□□□□□ -0.25
CTTN-208ENST00000498223 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
CTTN-208ENST00000498223 PPATQ06203 517 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 SPP2Q13103 211 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 ZYXQ15942 572 aaKnown RBP13.46□□□□□ -0.25
CTTN-208ENST00000498223 MB21D2Q8IYB1 491 aaPredicted RBP13.46□□□□□ -0.25
CTTN-208ENST00000498223 ZNF280CQ8ND82 737 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 CEP95Q96GE4 821 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 ZSCAN10Q96SZ4 725 aaPredicted RBP13.46□□□□□ -0.25
CTTN-208ENST00000498223 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 SH2D4AQ9H788 454 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 SAGE1Q9NXZ1 904 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 ISY1Q9ULR0 285 aaKnown RBP13.46□□□□□ -0.25
CTTN-208ENST00000498223 MTMR7Q9Y216 660 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 MYH6P13533 1939 aa13.46□□□□□ -0.25
CTTN-208ENST00000498223 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 TNKSO95271 1327 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 TTLL1O95922 423 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 CPA1P15085 419 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 GUCY1A2P33402 732 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 PPIL2Q13356 520 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 TMEM67Q5HYA8 995 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 NFXL1Q6ZNB6 911 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 DHX32Q7L7V1 743 aaKnown RBP13.45□□□□□ -0.26
CTTN-208ENST00000498223 RASAL3Q86YV0 1011 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 NKX2-3Q8TAU0 364 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 UPF3BQ9BZI7 483 aaKnown RBP13.45□□□□□ -0.26
CTTN-208ENST00000498223 TCP11L1Q9NUJ3 509 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 MTMR4Q9NYA4 1195 aa13.45□□□□□ -0.26
CTTN-208ENST00000498223 USP17L10C9JJH3 530 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 IRF6O14896 467 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 MTMR2Q13614 643 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 WTAPQ15007 396 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 IFIT1BQ5T764 474 aaKnown RBP13.44□□□□□ -0.26
CTTN-208ENST00000498223 SPRYD7Q5W111 196 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 GADL1Q6ZQY3 521 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 RUFY3Q7L099 469 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
CTTN-208ENST00000498223 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
CTTN-208ENST00000498223 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms