RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 Q96M66 194 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 FAM161BQ96MY7 647 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 ZSWIM5Q9P217 1185 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 ESR1P03372 595 aa6.46□□□□□ -1.38
CBX3-208ENST00000497498 CAMK2GQ13555 558 aaPredicted RBP6.46□□□□□ -1.38
CBX3-208ENST00000497498 PKN1Q16512 942 aa6.46□□□□□ -1.38
CBX3-208ENST00000497498 MLANAQ16655 118 aa6.46□□□□□ -1.38
CBX3-208ENST00000497498 DIEXFQ68CQ4 756 aaKnown RBP6.46□□□□□ -1.38
CBX3-208ENST00000497498 BNC2Q6ZN30 1099 aaPredicted RBP6.46□□□□□ -1.38
CBX3-208ENST00000497498 GATAD2BQ8WXI9 593 aa6.46□□□□□ -1.38
CBX3-208ENST00000497498 SLC38A3Q99624 504 aa6.46□□□□□ -1.38
CBX3-208ENST00000497498 DUSP15Q9H1R2 295 aaPredicted RBP6.46□□□□□ -1.38
CBX3-208ENST00000497498 CORINQ9Y5Q5 1042 aa6.46□□□□□ -1.38
CBX3-208ENST00000497498 PRR36Q9H6K5 1346 aa6.46□□□□□ -1.38
CBX3-208ENST00000497498 PLCG1P19174 1290 aa6.45□□□□□ -1.38
CBX3-208ENST00000497498 GAB4Q2WGN9 574 aa6.45□□□□□ -1.38
CBX3-208ENST00000497498 TMEM67Q5HYA8 995 aa6.45□□□□□ -1.38
CBX3-208ENST00000497498 CYB5D2Q8WUJ1 264 aa6.45□□□□□ -1.38
CBX3-208ENST00000497498 RHOVQ96L33 236 aa6.45□□□□□ -1.38
CBX3-208ENST00000497498 UPK3BL1B0FP48 263 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 UPK3BL2E5RIL1 263 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 SORBS3O60504 671 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 F13A1P00488 732 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 PF4P02776 101 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 SRFP11831 508 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 SLFN12Q8IYM2 578 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 TMEM74Q96NL1 305 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 RSRP1Q9BUV0 290 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 GPR62Q9BZJ7 368 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 SLAMF8Q9P0V8 285 aa6.44□□□□□ -1.38
CBX3-208ENST00000497498 WASH4PA8MWX3 477 aa6.43□□□□□ -1.38
CBX3-208ENST00000497498 BPNT1O95861 308 aa6.43□□□□□ -1.38
CBX3-208ENST00000497498 YARSP54577 528 aaKnown RBP6.43□□□□□ -1.38
CBX3-208ENST00000497498 RALGPS1Q5JS13 557 aa6.43□□□□□ -1.38
CBX3-208ENST00000497498 TTC6Q86TZ1 520 aa6.43□□□□□ -1.38
CBX3-208ENST00000497498 CILP2Q8IUL8 1156 aa6.43□□□□□ -1.38
CBX3-208ENST00000497498 DTWD2Q8NBA8 298 aa6.43□□□□□ -1.38
CBX3-208ENST00000497498 FAM13CQ8NE31 585 aa6.43□□□□□ -1.38
CBX3-208ENST00000497498 DNAJC25-GNG10A0A024R161 153 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 F6X3S4 739 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 ERCC3P19447 782 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 TPP2P29144 1249 aaPredicted RBP6.42□□□□□ -1.38
CBX3-208ENST00000497498 TAGLNQ01995 201 aaKnown RBP6.42□□□□□ -1.38
CBX3-208ENST00000497498 PWP1Q13610 501 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 MPZL3Q6UWV2 235 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 PRR23BQ6ZRT6 265 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 RELL1Q8IUW5 271 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 TRIT1Q9H3H1 467 aaKnown RBP6.42□□□□□ -1.38
CBX3-208ENST00000497498 TMEM59LQ9UK28 342 aa6.42□□□□□ -1.38
CBX3-208ENST00000497498 TSPAN15O95858 294 aa6.41□□□□□ -1.38
CBX3-208ENST00000497498 GBP2P32456 591 aaPredicted RBP6.41□□□□□ -1.38
CBX3-208ENST00000497498 TSPYL5Q86VY4 417 aaPredicted RBP6.41□□□□□ -1.38
CBX3-208ENST00000497498 CREG2Q8IUH2 290 aa6.41□□□□□ -1.38
CBX3-208ENST00000497498 RNF141Q8WVD5 230 aa6.41□□□□□ -1.38
CBX3-208ENST00000497498 ADAMTS10Q9H324 1103 aa6.41□□□□□ -1.38
CBX3-208ENST00000497498 GPATCH2Q9NW75 528 aa6.41□□□□□ -1.38
CBX3-208ENST00000497498 REV1Q9UBZ9 1251 aa6.41□□□□□ -1.38
CBX3-208ENST00000497498 KCNH3Q9ULD8 1083 aa6.41□□□□□ -1.38
CBX3-208ENST00000497498 POLR3KQ9Y2Y1 108 aaPredicted RBP6.41□□□□□ -1.38
CBX3-208ENST00000497498 HTR3BO95264 441 aa6.4□□□□□ -1.38
CBX3-208ENST00000497498 HPXP02790 462 aa6.4□□□□□ -1.38
CBX3-208ENST00000497498 RAC2P15153 192 aa6.4□□□□□ -1.38
CBX3-208ENST00000497498 GARTP22102 1010 aa6.4□□□□□ -1.38
CBX3-208ENST00000497498 ABHD4Q8TB40 342 aa6.4□□□□□ -1.38
CBX3-208ENST00000497498 PPP1R16BQ96T49 567 aa6.4□□□□□ -1.38
CBX3-208ENST00000497498 MRS2Q9HD23 443 aa6.4□□□□□ -1.38
CBX3-208ENST00000497498 VTI1BQ9UEU0 232 aa6.4□□□□□ -1.38
CBX3-208ENST00000497498 ITGAEP38570 1179 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 RAP1GAPP47736 663 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 MPP2Q14168 576 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 SPOCD1Q6ZMY3 1216 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 GOLM1Q8NBJ4 401 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 MYLIPQ8WY64 445 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 SP110Q9HB58 689 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 DUSP13Q9UII6 198 aa6.39□□□□□ -1.39
CBX3-208ENST00000497498 CHURC1-FNTBB4DL54 471 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 LRRN2O75325 713 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 KRT1P04264 644 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 HK2P52789 917 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 ERVFC1P60507 584 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 FAM160A1Q05DH4 1040 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 EGR3Q06889 387 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 FAM196AQ6ZSG2 479 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 SYDE1Q6ZW31 735 aaPredicted RBP6.38□□□□□ -1.39
CBX3-208ENST00000497498 ERMP1Q7Z2K6 904 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 REC114Q7Z4M0 266 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 FBXO15Q8NCQ5 510 aaPredicted RBP6.38□□□□□ -1.39
CBX3-208ENST00000497498 CCDC74BQ96LY2 380 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 KREMEN1Q96MU8 473 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 KCNQ5Q9NR82 932 aa6.38□□□□□ -1.39
CBX3-208ENST00000497498 RBM47A0AV96 593 aaKnown RBP6.37□□□□□ -1.39
CBX3-208ENST00000497498 MINDY4BA8MYZ0 360 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 GRIN3BO60391 1043 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 DNAJA2O60884 412 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 ZGLP1P0C6A0 271 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 CCDC27Q2M243 656 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 SNAP47Q5SQN1 464 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms