RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 HHIPL1Q96JK4 782 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 ZSCAN10Q96SZ4 725 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-222ENST00000496567 IL17RBQ9NRM6 502 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 MTMR4Q9NYA4 1195 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-222ENST00000496567 CYP46A1Q9Y6A2 500 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 WDR19Q8NEZ3 1342 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 ERICH2A1L162 156 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 PRC1O43663 620 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 PPATQ06203 517 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 RUFY3Q7L099 469 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 SPDYE5A6NIY4 337 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 TTLL1O95922 423 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 RPS6KB1P23443 525 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 ANTXR2P58335 489 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 CHST3Q7LGC8 479 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 TMEM87BQ96K49 555 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 TTC14Q96N46 770 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 ZKSCAN3Q9BRR0 538 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 ARHGEF10LQ9HCE6 1279 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 NYAP2Q9P242 653 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.6■■□□□ 1.69
C9orf3-222ENST00000496567 ZHX2Q9Y6X8 837 aa25.6■■□□□ 1.69
C9orf3-222ENST00000496567 TNKSO95271 1327 aa25.59■■□□□ 1.69
C9orf3-222ENST00000496567 IFIT3O14879 490 aaKnown RBP25.59■■□□□ 1.69
C9orf3-222ENST00000496567 NMT2O60551 498 aa25.59■■□□□ 1.69
C9orf3-222ENST00000496567 EXOSC10Q01780 885 aaKnown RBP25.59■■□□□ 1.69
C9orf3-222ENST00000496567 RGMBQ6NW40 437 aa25.59■■□□□ 1.69
C9orf3-222ENST00000496567 DGKHQ86XP1 1220 aa25.59■■□□□ 1.69
C9orf3-222ENST00000496567 OPTNQ96CV9 577 aa25.59■■□□□ 1.69
C9orf3-222ENST00000496567 WDR18Q9BV38 432 aa25.59■■□□□ 1.69
C9orf3-222ENST00000496567 STX8Q9UNK0 236 aa25.59■■□□□ 1.69
C9orf3-222ENST00000496567 ZNF157P51786 506 aaPredicted RBP25.58■■□□□ 1.69
C9orf3-222ENST00000496567 EEF2P13639 858 aaKnown RBP25.57■■□□□ 1.68
C9orf3-222ENST00000496567 CPA1P15085 419 aa25.57■■□□□ 1.68
C9orf3-222ENST00000496567 NOVP48745 357 aa25.57■■□□□ 1.68
C9orf3-222ENST00000496567 ATP2B2Q01814 1243 aa25.57■■□□□ 1.68
C9orf3-222ENST00000496567 COL9A3Q14050 684 aaPredicted RBP25.57■■□□□ 1.68
C9orf3-222ENST00000496567 CCDC84Q86UT8 332 aaPredicted RBP25.57■■□□□ 1.68
C9orf3-222ENST00000496567 ZNF280CQ8ND82 737 aa25.57■■□□□ 1.68
C9orf3-222ENST00000496567 OTUD5Q96G74 571 aa25.57■■□□□ 1.68
C9orf3-222ENST00000496567 UPF3BQ9BZI7 483 aaKnown RBP25.57■■□□□ 1.68
C9orf3-222ENST00000496567 SH2D4AQ9H788 454 aa25.57■■□□□ 1.68
C9orf3-222ENST00000496567 CLIP2Q9UDT6 1046 aa25.57■■□□□ 1.68
C9orf3-222ENST00000496567 PPIL2Q13356 520 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 TMEM67Q5HYA8 995 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 CLEC10AQ8IUN9 316 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 ENAHQ8N8S7 591 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-222ENST00000496567 KIF2CQ99661 725 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 AFG3L2Q9Y4W6 797 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 C1QTNF8P60827 252 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 FGD1P98174 961 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 WTAPQ15007 396 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 SIAH1Q8IUQ4 282 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 IGDCC4Q8TDY8 1250 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 CNKSR2Q8WXI2 1034 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 ANKS1AQ92625 1134 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 MKL1Q969V6 931 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 SYNPO2Q9UMS6 1093 aa25.56■■□□□ 1.68
C9orf3-222ENST00000496567 ZBTB48P10074 688 aaPredicted RBP25.55■■□□□ 1.68
C9orf3-222ENST00000496567 SPP2Q13103 211 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 SEC23AQ15436 765 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 IFIT1BQ5T764 474 aaKnown RBP25.55■■□□□ 1.68
C9orf3-222ENST00000496567 RCSD1Q6JBY9 416 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 TMTC2Q8N394 836 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 IL27Q8NEV9 243 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 CCDC102AQ96A19 550 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 WNK4Q96J92 1243 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 FEZ1Q99689 392 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 PHIPQ8WWQ0 1821 aa25.55■■□□□ 1.68
C9orf3-222ENST00000496567 USP17L10C9JJH3 530 aa25.54■■□□□ 1.68
C9orf3-222ENST00000496567 TOP1P11387 765 aaKnown RBP25.54■■□□□ 1.68
C9orf3-222ENST00000496567 LIFRP42702 1097 aa25.54■■□□□ 1.68
C9orf3-222ENST00000496567 RABEP1Q15276 862 aa25.54■■□□□ 1.68
C9orf3-222ENST00000496567 TCEANC2Q96MN5 208 aa25.54■■□□□ 1.68
C9orf3-222ENST00000496567 LRRC2Q9BYS8 371 aa25.54■■□□□ 1.68
C9orf3-222ENST00000496567 PDRG1Q9NUG6 133 aa25.54■■□□□ 1.68
C9orf3-222ENST00000496567 TMX2Q9Y320 296 aa25.54■■□□□ 1.68
C9orf3-222ENST00000496567 TRIM75PA6NK02 468 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 SH2B2O14492 632 aaPredicted RBP25.53■■□□□ 1.68
C9orf3-222ENST00000496567 CXCL11O14625 94 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 IRF6O14896 467 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 NEK4P51957 841 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 DEFB115Q30KQ5 88 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 SPRYD7Q5W111 196 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 RASAL3Q86YV0 1011 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 FBXL16Q8N461 479 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 ACER1Q8TDN7 264 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 TMEM47Q9BQJ4 181 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 KIAA1683Q9H0B3 1180 aa25.53■■□□□ 1.68
C9orf3-222ENST00000496567 A0A1W2PRG0 241 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 RASSF10A6NK89 507 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 C19orf81C9J6K1 198 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 ECE1P42892 770 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 USP14P54578 494 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 BACE1P56817 501 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 Q6ZUG5 572 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 KAT14Q9H8E8 782 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 LY9Q9HBG7 655 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 TSHZ2Q9NRE2 1034 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms