RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	DDRGK1	Q96HY6	314 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	C12orf42	Q96LP6	360 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	SEC62	Q99442	399 aa	Known RBP	13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	P2RX7	Q99572	595 aa	Known RBP	13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	FSD1	Q9BTV5	496 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	DOCK3	Q8IZD9	2030 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	HOXD10	P28358	340 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP14	P54578	494 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	FCGRT	P55899	365 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	NUCB1	Q02818	461 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	MLLT1	Q03111	559 aa	Predicted RBP	13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	SLC9C1	Q4G0N8	1177 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	ZMYM1	Q5SVZ6	1142 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	SIAH1	Q8IUQ4	282 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	AMOTL1	Q8IY63	956 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	ZNF333	Q96JL9	665 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	LNPK	Q9C0E8	428 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643	MORF4L1	Q9UBU8	362 aa		13.14	□□□□□ -0.31
DCTN1-223	ENST00000495643		A0A1W2PRG0	241 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	MPHOSPH10	O00566	681 aa	Known RBP	13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	AKR1B1	P15121	316 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	GNAT2	P19087	354 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	HERVK_113	P62684	666 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	IRX3	P78415	501 aa	Predicted RBP	13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	ZYX	Q15942	572 aa	Known RBP	13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	B4GALNT3	Q6L9W6	998 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	POTEE	Q6S8J3	1075 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	TMEM179	Q6ZVK1	233 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	NBPF11	Q86T75	865 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	CHD1L	Q86WJ1	897 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	EVI5L	Q96CN4	794 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	CCDC17	Q96LX7	622 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	FEZ1	Q99689	392 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	GREB1L	Q9C091	1923 aa	Predicted RBP	13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	MYPN	Q86TC9	1320 aa		13.13	□□□□□ -0.31
DCTN1-223	ENST00000495643	BRCA2	P51587	3418 aa		13.12	□□□□□ -0.31
DCTN1-223	ENST00000495643	ROBO3	Q96MS0	1386 aa		13.12	□□□□□ -0.31
DCTN1-223	ENST00000495643	PATL2	C9JE40	543 aa	Known RBP	13.12	□□□□□ -0.31
DCTN1-223	ENST00000495643	PRKCZ	Q05513	592 aa		13.12	□□□□□ -0.31
DCTN1-223	ENST00000495643	SH3TC2	Q8TF17	1288 aa		13.12	□□□□□ -0.31
DCTN1-223	ENST00000495643	RBPJL	Q9UBG7	517 aa		13.12	□□□□□ -0.31
DCTN1-223	ENST00000495643	GABRQ	Q9UN88	632 aa		13.12	□□□□□ -0.31
DCTN1-223	ENST00000495643	RLF	Q13129	1914 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	PLXNB2	O15031	1838 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	POTEF	A5A3E0	1075 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L15	C9J2P7	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L13	C9JLJ4	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L11	C9JVI0	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L18	D6R9N7	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L22	D6RA61	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L17	D6RBQ6	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L19	D6RCP7	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L20	D6RJB6	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	TNPO2	O14787	897 aa	Known RBP	13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	PEX10	O60683	326 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	VCAM1	P19320	739 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	USP17L24	Q0WX57	530 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	CATSPERG	Q6ZRH7	1159 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	TICAM2	Q86XR7	235 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	CLEC10A	Q8IUN9	316 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	PLEKHM2	Q8IWE5	1019 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	IFNL3	Q8IZI9	196 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	TXNRD2	Q9NNW7	524 aa		13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	KIAA0100	Q14667	2235 aa	Known RBP	13.11	□□□□□ -0.31
DCTN1-223	ENST00000495643	MINDY4B	A8MYZ0	360 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	FOXP2	O15409	715 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	APP	P05067	770 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	RASA1	P20936	1047 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	GRK4	P32298	578 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	FLT3LG	P49771	235 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	IRX6	P78412	446 aa	Predicted RBP	13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	KIAA1755	Q5JYT7	1200 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	RAET1E	Q8TD07	263 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	OSBPL3	Q9H4L5	887 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	TMX2	Q9Y320	296 aa		13.1	□□□□□ -0.31
DCTN1-223	ENST00000495643	PARP14	Q460N5	1801 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	CNMD	O75829	334 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	TDO2	P48775	406 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	ICA1	Q05084	483 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	IRF5	Q13568	498 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643		Q3C1V9	767 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	LBX2	Q6XYB7	198 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	CCDC129	Q6ZRS4	1044 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	GPRC5A	Q8NFJ5	357 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	COA7	Q96BR5	231 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	KANSL2	Q9H9L4	492 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	HELLS	Q9NRZ9	838 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	GJD2	Q9UKL4	321 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	RABGAP1	Q9Y3P9	1069 aa		13.09	□□□□□ -0.31
DCTN1-223	ENST00000495643	ADCY3	O60266	1144 aa		13.08	□□□□□ -0.32
DCTN1-223	ENST00000495643	EEF2	P13639	858 aa	Known RBP	13.08	□□□□□ -0.32
DCTN1-223	ENST00000495643	ERVK-9	P63128	1117 aa		13.08	□□□□□ -0.32
DCTN1-223	ENST00000495643	ERVK-24	P63145	666 aa		13.08	□□□□□ -0.32
DCTN1-223	ENST00000495643	STK11IP	Q8N1F8	1099 aa		13.08	□□□□□ -0.32
DCTN1-223	ENST00000495643	SLAIN1	Q8ND83	568 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms