RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 P2RX7Q99572 595 aaKnown RBP21.58■■□□□ 1.05
COL20A1-207ENST00000494913 LNPKQ9C0E8 428 aa21.58■■□□□ 1.05
COL20A1-207ENST00000494913 TAOK2Q9UL54 1235 aa21.58■■□□□ 1.05
COL20A1-207ENST00000494913 GSG1L2A8MUP6 293 aa21.58■■□□□ 1.04
COL20A1-207ENST00000494913 GPAA1O43292 621 aa21.58■■□□□ 1.04
COL20A1-207ENST00000494913 CDK8P49336 464 aa21.58■■□□□ 1.04
COL20A1-207ENST00000494913 FAM110CQ1W6H9 321 aa21.58■■□□□ 1.04
COL20A1-207ENST00000494913 MYPNQ86TC9 1320 aa21.57■■□□□ 1.04
COL20A1-207ENST00000494913 USP14P54578 494 aa21.57■■□□□ 1.04
COL20A1-207ENST00000494913 RAET1EQ8TD07 263 aa21.57■■□□□ 1.04
COL20A1-207ENST00000494913 SEC62Q99442 399 aaKnown RBP21.57■■□□□ 1.04
COL20A1-207ENST00000494913 KIAA1683Q9H0B3 1180 aa21.57■■□□□ 1.04
COL20A1-207ENST00000494913 APPP05067 770 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 GNAT2P19087 354 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 PRKCZQ05513 592 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 GIMAP6Q6P9H5 292 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 TMEM179Q6ZVK1 233 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 C16orf86Q6ZW13 317 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 SH3TC2Q8TF17 1288 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 ZNF333Q96JL9 665 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 C12orf42Q96LP6 360 aa21.56■■□□□ 1.04
COL20A1-207ENST00000494913 ARPP21Q9UBL0 812 aaPredicted RBP21.56■■□□□ 1.04
COL20A1-207ENST00000494913 TNPO2O14787 897 aaKnown RBP21.55■■□□□ 1.04
COL20A1-207ENST00000494913 AKR1B1P15121 316 aa21.55■■□□□ 1.04
COL20A1-207ENST00000494913 ZMYM1Q5SVZ6 1142 aa21.55■■□□□ 1.04
COL20A1-207ENST00000494913 MINDY4BA8MYZ0 360 aa21.54■■□□□ 1.04
COL20A1-207ENST00000494913 MYCP01106 439 aaPredicted RBP21.54■■□□□ 1.04
COL20A1-207ENST00000494913 HERVK_113P62684 666 aa21.54■■□□□ 1.04
COL20A1-207ENST00000494913 IRX6P78412 446 aaPredicted RBP21.54■■□□□ 1.04
COL20A1-207ENST00000494913 SBK1Q52WX2 424 aa21.54■■□□□ 1.04
COL20A1-207ENST00000494913 EVI5LQ96CN4 794 aa21.54■■□□□ 1.04
COL20A1-207ENST00000494913 CCDC17Q96LX7 622 aa21.54■■□□□ 1.04
COL20A1-207ENST00000494913 GABRQQ9UN88 632 aa21.54■■□□□ 1.04
COL20A1-207ENST00000494913 A0A1W2PRG0 241 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 POTEFA5A3E0 1075 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L15C9J2P7 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 PATL2C9JE40 543 aaKnown RBP21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L13C9JLJ4 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L11C9JVI0 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L18D6R9N7 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L22D6RA61 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L17D6RBQ6 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L19D6RCP7 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L20D6RJB6 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 USP17L24Q0WX57 530 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 CHD1LQ86WJ1 897 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 STK11IPQ8N1F8 1099 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 KIAA0100Q14667 2235 aaKnown RBP21.53■■□□□ 1.04
COL20A1-207ENST00000494913 MGAMO43451 1857 aa21.53■■□□□ 1.04
COL20A1-207ENST00000494913 PEX10O60683 326 aa21.52■■□□□ 1.04
COL20A1-207ENST00000494913 VCAM1P19320 739 aa21.52■■□□□ 1.04
COL20A1-207ENST00000494913 TDO2P48775 406 aa21.52■■□□□ 1.04
COL20A1-207ENST00000494913 NUCB1Q02818 461 aa21.52■■□□□ 1.04
COL20A1-207ENST00000494913 COA7Q96BR5 231 aa21.52■■□□□ 1.04
COL20A1-207ENST00000494913 TMEM106CQ9BVX2 250 aa21.52■■□□□ 1.04
COL20A1-207ENST00000494913 EPB41L4AQ9HCS5 686 aaPredicted RBP21.52■■□□□ 1.04
COL20A1-207ENST00000494913 MORF4L1Q9UBU8 362 aa21.52■■□□□ 1.04
COL20A1-207ENST00000494913 GRK4P32298 578 aa21.52■■□□□ 1.03
COL20A1-207ENST00000494913 FLT3LGP49771 235 aa21.52■■□□□ 1.03
COL20A1-207ENST00000494913 CATSPERGQ6ZRH7 1159 aa21.52■■□□□ 1.03
COL20A1-207ENST00000494913 CLEC10AQ8IUN9 316 aa21.52■■□□□ 1.03
COL20A1-207ENST00000494913 GPRC5AQ8NFJ5 357 aa21.52■■□□□ 1.03
COL20A1-207ENST00000494913 TXNRD2Q9NNW7 524 aa21.52■■□□□ 1.03
COL20A1-207ENST00000494913 RBPJLQ9UBG7 517 aa21.52■■□□□ 1.03
COL20A1-207ENST00000494913 TNRC18O15417 2968 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-207ENST00000494913 ICA1Q05084 483 aa21.51■■□□□ 1.03
COL20A1-207ENST00000494913 SIAH1Q8IUQ4 282 aa21.51■■□□□ 1.03
COL20A1-207ENST00000494913 IFNL3Q8IZI9 196 aa21.51■■□□□ 1.03
COL20A1-207ENST00000494913 NACAP1Q9BZK3 213 aa21.51■■□□□ 1.03
COL20A1-207ENST00000494913 BIN2Q9UBW5 565 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-207ENST00000494913 BRCA2P51587 3418 aa21.51■■□□□ 1.03
COL20A1-207ENST00000494913 MYH8P13535 1937 aa21.5■■□□□ 1.03
COL20A1-207ENST00000494913 GTF3C2Q8WUA4 911 aaPredicted RBP21.5■■□□□ 1.03
COL20A1-207ENST00000494913 PAGR1Q9BTK6 254 aa21.5■■□□□ 1.03
COL20A1-207ENST00000494913 RPAP3Q9H6T3 665 aaPredicted RBP21.5■■□□□ 1.03
COL20A1-207ENST00000494913 MKNK2Q9HBH9 465 aa21.5■■□□□ 1.03
COL20A1-207ENST00000494913 ARHGEF10LQ9HCE6 1279 aa21.5■■□□□ 1.03
COL20A1-207ENST00000494913 TRIM6-TRIM34B2RNG4 842 aa21.49■■□□□ 1.03
COL20A1-207ENST00000494913 ADCY3O60266 1144 aa21.49■■□□□ 1.03
COL20A1-207ENST00000494913 Q3C1V9 767 aa21.49■■□□□ 1.03
COL20A1-207ENST00000494913 POTEEQ6S8J3 1075 aa21.49■■□□□ 1.03
COL20A1-207ENST00000494913 CCDC129Q6ZRS4 1044 aa21.49■■□□□ 1.03
COL20A1-207ENST00000494913 PLEKHM2Q8IWE5 1019 aa21.49■■□□□ 1.03
COL20A1-207ENST00000494913 DOCK3Q8IZD9 2030 aa21.49■■□□□ 1.03
COL20A1-207ENST00000494913 ERVK-9P63128 1117 aa21.48■■□□□ 1.03
COL20A1-207ENST00000494913 ERVK-24P63145 666 aa21.48■■□□□ 1.03
COL20A1-207ENST00000494913 ATP2B2Q01814 1243 aa21.48■■□□□ 1.03
COL20A1-207ENST00000494913 SH2D4AQ9H788 454 aa21.48■■□□□ 1.03
COL20A1-207ENST00000494913 KANSL2Q9H9L4 492 aa21.48■■□□□ 1.03
COL20A1-207ENST00000494913 TMX2Q9Y320 296 aa21.48■■□□□ 1.03
COL20A1-207ENST00000494913 EEF2P13639 858 aaKnown RBP21.47■■□□□ 1.03
COL20A1-207ENST00000494913 EN2P19622 333 aaPredicted RBP21.47■■□□□ 1.03
COL20A1-207ENST00000494913 RASA1P20936 1047 aa21.47■■□□□ 1.03
COL20A1-207ENST00000494913 IRF5Q13568 498 aa21.47■■□□□ 1.03
COL20A1-207ENST00000494913 MTFR1Q15390 333 aa21.47■■□□□ 1.03
COL20A1-207ENST00000494913 KIAA1755Q5JYT7 1200 aa21.47■■□□□ 1.03
COL20A1-207ENST00000494913 SLAIN1Q8ND83 568 aa21.47■■□□□ 1.03
COL20A1-207ENST00000494913 RILPL2Q969X0 211 aa21.47■■□□□ 1.03
COL20A1-207ENST00000494913 NAPBQ9H115 298 aa21.47■■□□□ 1.03
COL20A1-207ENST00000494913 ROBO3Q96MS0 1386 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms