RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CTR9Q6PD62 1173 aa39.87■■■■□ 3.97
CBX4-203ENST00000494546 P2RX7Q99572 595 aaKnown RBP39.87■■■■□ 3.97
CBX4-203ENST00000494546 RWDD1Q9H446 243 aaPredicted RBP39.87■■■■□ 3.97
CBX4-203ENST00000494546 TAOK2Q9UL54 1235 aa39.87■■■■□ 3.97
CBX4-203ENST00000494546 USP14P54578 494 aa39.86■■■■□ 3.97
CBX4-203ENST00000494546 KIAA1683Q9H0B3 1180 aa39.86■■■■□ 3.97
CBX4-203ENST00000494546 GABRQQ9UN88 632 aa39.86■■■■□ 3.97
CBX4-203ENST00000494546 C12orf42Q96LP6 360 aa39.85■■■■□ 3.97
CBX4-203ENST00000494546 MGAMO43451 1857 aa39.85■■■■□ 3.97
CBX4-203ENST00000494546 M0R2C6 588 aa39.84■■■■□ 3.97
CBX4-203ENST00000494546 GPAA1O43292 621 aa39.84■■■■□ 3.97
CBX4-203ENST00000494546 CDK8P49336 464 aa39.84■■■■□ 3.97
CBX4-203ENST00000494546 TMEM106CQ9BVX2 250 aa39.84■■■■□ 3.97
CBX4-203ENST00000494546 ARPP21Q9UBL0 812 aaPredicted RBP39.84■■■■□ 3.97
CBX4-203ENST00000494546 GSG1L2A8MUP6 293 aa39.83■■■■□ 3.97
CBX4-203ENST00000494546 HERVK_113P62684 666 aa39.83■■■■□ 3.97
CBX4-203ENST00000494546 TMEM179Q6ZVK1 233 aa39.83■■■■□ 3.97
CBX4-203ENST00000494546 AKR1B1P15121 316 aa39.82■■■■□ 3.97
CBX4-203ENST00000494546 GRK4P32298 578 aa39.82■■■■□ 3.97
CBX4-203ENST00000494546 C16orf86Q6ZW13 317 aa39.82■■■■□ 3.97
CBX4-203ENST00000494546 B4GALNT3Q6L9W6 998 aa39.81■■■■□ 3.96
CBX4-203ENST00000494546 COA7Q96BR5 231 aa39.81■■■■□ 3.96
CBX4-203ENST00000494546 LNPKQ9C0E8 428 aa39.81■■■■□ 3.96
CBX4-203ENST00000494546 STAP2Q9UGK3 403 aa39.81■■■■□ 3.96
CBX4-203ENST00000494546 FLT3LGP49771 235 aa39.8■■■■□ 3.96
CBX4-203ENST00000494546 PDE1AP54750 535 aa39.8■■■■□ 3.96
CBX4-203ENST00000494546 GIMAP6Q6P9H5 292 aa39.8■■■■□ 3.96
CBX4-203ENST00000494546 CCDC17Q96LX7 622 aa39.8■■■■□ 3.96
CBX4-203ENST00000494546 SEC62Q99442 399 aaKnown RBP39.8■■■■□ 3.96
CBX4-203ENST00000494546 MORF4L1Q9UBU8 362 aa39.8■■■■□ 3.96
CBX4-203ENST00000494546 USP17L15C9J2P7 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 USP17L13C9JLJ4 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 USP17L11C9JVI0 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 USP17L18D6R9N7 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 USP17L22D6RA61 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 USP17L17D6RBQ6 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 USP17L19D6RCP7 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 USP17L20D6RJB6 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 PEX10O60683 326 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 APPP05067 770 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 GNAT2P19087 354 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 VCAM1P19320 739 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 USP17L24Q0WX57 530 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 SMC5Q8IY18 1101 aa39.79■■■■□ 3.96
CBX4-203ENST00000494546 IGHDP01880 384 aa39.78■■■■□ 3.96
CBX4-203ENST00000494546 CENPFP49454 3210 aa39.78■■■■□ 3.96
CBX4-203ENST00000494546 TXNRD2Q9NNW7 524 aa39.78■■■■□ 3.96
CBX4-203ENST00000494546 BIN2Q9UBW5 565 aaPredicted RBP39.78■■■■□ 3.96
CBX4-203ENST00000494546 A0A1W2PRG0 241 aa39.77■■■■□ 3.96
CBX4-203ENST00000494546 MINDY4BA8MYZ0 360 aa39.77■■■■□ 3.96
CBX4-203ENST00000494546 SBK1Q52WX2 424 aa39.77■■■■□ 3.96
CBX4-203ENST00000494546 CLEC10AQ8IUN9 316 aa39.77■■■■□ 3.96
CBX4-203ENST00000494546 GPRC5AQ8NFJ5 357 aa39.77■■■■□ 3.96
CBX4-203ENST00000494546 MYH8P13535 1937 aa39.76■■■■□ 3.96
CBX4-203ENST00000494546 TDO2P48775 406 aa39.76■■■■□ 3.96
CBX4-203ENST00000494546 ZMYM1Q5SVZ6 1142 aa39.76■■■■□ 3.96
CBX4-203ENST00000494546 STK11IPQ8N1F8 1099 aa39.76■■■■□ 3.96
CBX4-203ENST00000494546 PAGR1Q9BTK6 254 aa39.76■■■■□ 3.96
CBX4-203ENST00000494546 EPB41L4AQ9HCS5 686 aaPredicted RBP39.76■■■■□ 3.96
CBX4-203ENST00000494546 EN2P19622 333 aaPredicted RBP39.75■■■■□ 3.95
CBX4-203ENST00000494546 ICA1Q05084 483 aa39.75■■■■□ 3.95
CBX4-203ENST00000494546 CATSPERGQ6ZRH7 1159 aa39.75■■■■□ 3.95
CBX4-203ENST00000494546 SLAIN1Q8ND83 568 aa39.75■■■■□ 3.95
CBX4-203ENST00000494546 GTF3C2Q8WUA4 911 aaPredicted RBP39.75■■■■□ 3.95
CBX4-203ENST00000494546 RPAP3Q9H6T3 665 aaPredicted RBP39.75■■■■□ 3.95
CBX4-203ENST00000494546 RBPJLQ9UBG7 517 aa39.75■■■■□ 3.95
CBX4-203ENST00000494546 ADCY3O60266 1144 aa39.74■■■■□ 3.95
CBX4-203ENST00000494546 EVI5LQ96CN4 794 aa39.74■■■■□ 3.95
CBX4-203ENST00000494546 PATL2C9JE40 543 aaKnown RBP39.73■■■■□ 3.95
CBX4-203ENST00000494546 MTFR1Q15390 333 aa39.73■■■■□ 3.95
CBX4-203ENST00000494546 ARHGEF10LQ9HCE6 1279 aa39.73■■■■□ 3.95
CBX4-203ENST00000494546 RBBP6Q7Z6E9 1792 aaKnown RBP39.72■■■■□ 3.95
CBX4-203ENST00000494546 ELNP15502 786 aa39.71■■■■□ 3.95
CBX4-203ENST00000494546 ERVK-9P63128 1117 aa39.71■■■■□ 3.95
CBX4-203ENST00000494546 ERVK-24P63145 666 aa39.71■■■■□ 3.95
CBX4-203ENST00000494546 IRF5Q13568 498 aa39.71■■■■□ 3.95
CBX4-203ENST00000494546 SIAH1Q8IUQ4 282 aa39.71■■■■□ 3.95
CBX4-203ENST00000494546 IFNL3Q8IZI9 196 aa39.71■■■■□ 3.95
CBX4-203ENST00000494546 UBXN2AP68543 259 aa39.7■■■■□ 3.95
CBX4-203ENST00000494546 Q3C1V9 767 aa39.7■■■■□ 3.95
CBX4-203ENST00000494546 POTEEQ6S8J3 1075 aa39.7■■■■□ 3.95
CBX4-203ENST00000494546 CHD1LQ86WJ1 897 aa39.7■■■■□ 3.95
CBX4-203ENST00000494546 NACAP1Q9BZK3 213 aa39.7■■■■□ 3.95
CBX4-203ENST00000494546 KIAA0100Q14667 2235 aaKnown RBP39.69■■■■□ 3.94
CBX4-203ENST00000494546 ATP2B2Q01814 1243 aa39.69■■■■□ 3.94
CBX4-203ENST00000494546 CCAR1Q8IX12 1150 aaKnown RBP39.69■■■■□ 3.94
CBX4-203ENST00000494546 SH2D4AQ9H788 454 aa39.69■■■■□ 3.94
CBX4-203ENST00000494546 MKNK2Q9HBH9 465 aa39.69■■■■□ 3.94
CBX4-203ENST00000494546 NUCB1Q02818 461 aa39.68■■■■□ 3.94
CBX4-203ENST00000494546 PXYLP1Q8TE99 480 aa39.68■■■■□ 3.94
CBX4-203ENST00000494546 KANSL2Q9H9L4 492 aa39.68■■■■□ 3.94
CBX4-203ENST00000494546 TMX2Q9Y320 296 aa39.68■■■■□ 3.94
CBX4-203ENST00000494546 RABGAP1Q9Y3P9 1069 aa39.68■■■■□ 3.94
CBX4-203ENST00000494546 IRX6P78412 446 aaPredicted RBP39.67■■■■□ 3.94
CBX4-203ENST00000494546 TANGO6Q9C0B7 1094 aa39.67■■■■□ 3.94
CBX4-203ENST00000494546 ROBO3Q96MS0 1386 aa39.67■■■■□ 3.94
CBX4-203ENST00000494546 CCL5P13501 91 aa39.66■■■■□ 3.94
CBX4-203ENST00000494546 EEF2P13639 858 aaKnown RBP39.66■■■■□ 3.94
CBX4-203ENST00000494546 RASA1P20936 1047 aa39.66■■■■□ 3.94
CBX4-203ENST00000494546 KIAA1755Q5JYT7 1200 aa39.66■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms