RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 USP17L17D6RBQ6 530 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 USP17L19D6RCP7 530 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 USP17L20D6RJB6 530 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
UBR4-216ENST00000494503 CCND3P30281 292 aaPredicted RBP11.71□□□□□ -0.53
UBR4-216ENST00000494503 USP14P54578 494 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 CACNB2Q08289 660 aaPredicted RBP11.71□□□□□ -0.53
UBR4-216ENST00000494503 USP17L24Q0WX57 530 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 Q3C1V9 767 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 TTC6Q86TZ1 520 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 EAF2Q96CJ1 260 aaPredicted RBP11.71□□□□□ -0.53
UBR4-216ENST00000494503 UBE2OQ9C0C9 1292 aaKnown RBP11.71□□□□□ -0.53
UBR4-216ENST00000494503 PRO3102Q9H379 93 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 EMILIN3Q9NT22 766 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 RBPJLQ9UBG7 517 aa11.71□□□□□ -0.53
UBR4-216ENST00000494503 FRMPD3Q5JV73 1810 aa11.7□□□□□ -0.54
UBR4-216ENST00000494503 MAGEB6P1A0A0J9YX57 407 aa11.7□□□□□ -0.54
UBR4-216ENST00000494503 XRCC5P13010 732 aaKnown RBP11.7□□□□□ -0.54
UBR4-216ENST00000494503 MAGEA10P43363 369 aaPredicted RBP11.7□□□□□ -0.54
UBR4-216ENST00000494503 MFSD14CQ5VZR4 134 aa11.7□□□□□ -0.54
UBR4-216ENST00000494503 CERS3Q8IU89 383 aa11.7□□□□□ -0.54
UBR4-216ENST00000494503 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
UBR4-216ENST00000494503 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
UBR4-216ENST00000494503 TANGO6Q9C0B7 1094 aa11.7□□□□□ -0.54
UBR4-216ENST00000494503 ANTXR1Q9H6X2 564 aa11.7□□□□□ -0.54
UBR4-216ENST00000494503 IL1RAPL2Q9NP60 686 aa11.7□□□□□ -0.54
UBR4-216ENST00000494503 OGDHLQ9ULD0 1010 aa11.7□□□□□ -0.54
UBR4-216ENST00000494503 RLBP1P12271 317 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 VCAM1P19320 739 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 MDM2Q00987 491 aaPredicted RBP11.69□□□□□ -0.54
UBR4-216ENST00000494503 ATP2B2Q01814 1243 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 MAP2K5Q13163 448 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 ERC1Q8IUD2 1116 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 DEFB123Q8N688 67 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 ACER1Q8TDN7 264 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 EDC3Q96F86 508 aaKnown RBP11.69□□□□□ -0.54
UBR4-216ENST00000494503 CRNKL1Q9BZJ0 848 aaKnown RBP11.69□□□□□ -0.54
UBR4-216ENST00000494503 RPAP3Q9H6T3 665 aaPredicted RBP11.69□□□□□ -0.54
UBR4-216ENST00000494503 MCM9Q9NXL9 1143 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 RABGAP1Q9Y3P9 1069 aa11.69□□□□□ -0.54
UBR4-216ENST00000494503 PFASO15067 1338 aa11.68□□□□□ -0.54
UBR4-216ENST00000494503 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
UBR4-216ENST00000494503 PLS1Q14651 629 aa11.68□□□□□ -0.54
UBR4-216ENST00000494503 SLC9C2Q5TAH2 1124 aa11.68□□□□□ -0.54
UBR4-216ENST00000494503 MAP3K21Q5TCX8 1036 aa11.68□□□□□ -0.54
UBR4-216ENST00000494503 CEP85Q6P2H3 762 aa11.68□□□□□ -0.54
UBR4-216ENST00000494503 METTL16Q86W50 562 aaKnown RBP11.68□□□□□ -0.54
UBR4-216ENST00000494503 TDHQ8IZJ6 230 aa11.68□□□□□ -0.54
UBR4-216ENST00000494503 GDF15Q99988 308 aa11.68□□□□□ -0.54
UBR4-216ENST00000494503 SENP6Q9GZR1 1112 aaPredicted RBP11.68□□□□□ -0.54
UBR4-216ENST00000494503 NOP58Q9Y2X3 529 aaKnown RBP11.68□□□□□ -0.54
UBR4-216ENST00000494503 GOLIM4O00461 696 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 DLL1O00548 723 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 RAD21O60216 631 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 IGSF3O75054 1194 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 IFIT2P09913 472 aaKnown RBP11.67□□□□□ -0.54
UBR4-216ENST00000494503 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
UBR4-216ENST00000494503 PLCD1P51178 756 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 SEPT2Q15019 361 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
UBR4-216ENST00000494503 LRRC26Q2I0M4 334 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 MORN1Q5T089 497 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 TATDN1Q6P1N9 297 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 CATSPERGQ6ZRH7 1159 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 Q7L0L9 218 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 DPP9Q86TI2 863 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 PANK1Q8TE04 598 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
UBR4-216ENST00000494503 KIAA1683Q9H0B3 1180 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 EHD4Q9H223 541 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 PRKAG2Q9UGJ0 569 aa11.67□□□□□ -0.54
UBR4-216ENST00000494503 BAZ2AQ9UIF9 1905 aaKnown RBP11.66□□□□□ -0.54
UBR4-216ENST00000494503 SLC15A5A6NIM6 579 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 CNMDO75829 334 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 PDE6AP16499 860 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 PTPREP23469 700 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 CYP2C19P33261 490 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 BMP8BP34820 402 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 SHMT1P34896 483 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 HSP90AB4PQ58FF6 505 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
UBR4-216ENST00000494503 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 C12orf42Q96LP6 360 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 FLRT1Q9NZU1 646 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 BTBD7Q9P203 1132 aa11.66□□□□□ -0.54
UBR4-216ENST00000494503 ZNF532Q9HCE3 1301 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
UBR4-216ENST00000494503 ANO1Q5XXA6 986 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 LHX8Q68G74 356 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 NCAPG2Q86XI2 1143 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 SPICE1Q8N0Z3 855 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 RHPN1Q8TCX5 695 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 USP6NLQ92738 828 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 PRDM5Q9NQX1 630 aaPredicted RBP11.65□□□□□ -0.54
UBR4-216ENST00000494503 DDX20Q9UHI6 824 aaKnown RBP11.65□□□□□ -0.54
UBR4-216ENST00000494503 COL6A3P12111 3177 aa11.65□□□□□ -0.54
UBR4-216ENST00000494503 MSCO60682 206 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 HMMRO75330 724 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms