RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 DNM3Q9UQ16 869 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 MAGEA1P43355 309 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 CROCCP2Q86T23 111 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 CCDC84Q86UT8 332 aaPredicted RBP21.28■■□□□ 1
COL27A1-207ENST00000494090 AZI2Q9H6S1 392 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 NKIRAS1Q9NYS0 192 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 MAGI3Q5TCQ9 1506 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 NR1I2O75469 434 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 CFAP157Q5JU67 520 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 DNAJC10Q8IXB1 793 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 TTC16Q8NEE8 873 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 TSKSQ9UJT2 592 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 CHMP2AO43633 222 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 STK10O94804 968 aaKnown RBP21.28■■□□□ 1
COL27A1-207ENST00000494090 CABP7Q86V35 215 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 KIFC2Q96AC6 838 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 SYNMO15061 1565 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 MYOM2P54296 1465 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 GPT2Q8TD30 523 aa21.28■■□□□ 1
COL27A1-207ENST00000494090 HARSP12081 509 aaKnown RBP21.27■■□□□ 1
COL27A1-207ENST00000494090 USP28Q96RU2 1077 aa21.27■■□□□ 1
COL27A1-207ENST00000494090 DNM2P50570 870 aa21.27■■□□□ 1
COL27A1-207ENST00000494090 PPARAQ07869 468 aa21.27■■□□□ 1
COL27A1-207ENST00000494090 UTP11Q9Y3A2 253 aaKnown RBP21.27■■□□□ 1
COL27A1-207ENST00000494090 KDM5CP41229 1560 aa21.27■■□□□ 1
COL27A1-207ENST00000494090 TRMT44Q8IYL2 757 aaKnown RBP21.27■■□□□ 1
COL27A1-207ENST00000494090 RASSF4Q9H2L5 321 aa21.27■■□□□ 1
COL27A1-207ENST00000494090 OSBPL3Q9H4L5 887 aa21.27■■□□□ 1
COL27A1-207ENST00000494090 VPS54Q9P1Q0 977 aa21.27■■□□□ 1
COL27A1-207ENST00000494090 GOLGA6CA6NDK9 693 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 GOLGA6DP0CG33 693 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 GOLGA6AQ9NYA3 693 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 ARPP21Q9UBL0 812 aaPredicted RBP21.26■□□□□ 0.99
COL27A1-207ENST00000494090 AATKQ6ZMQ8 1374 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 CALCRLQ16602 461 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 NOSTRINQ8IVI9 506 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 ZNF654Q8IZM8 581 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 NUCKS1Q9H1E3 243 aaKnown RBP21.26■□□□□ 0.99
COL27A1-207ENST00000494090 HERC4Q5GLZ8 1057 aaPredicted RBP21.26■□□□□ 0.99
COL27A1-207ENST00000494090 C10orf67Q8IYJ2 551 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 SLF1Q9BQI6 1058 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 CMA1P23946 247 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 PKP1Q13835 747 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 NCAPH2Q6IBW4 605 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 CEP57Q86XR8 500 aa21.26■□□□□ 0.99
COL27A1-207ENST00000494090 HSPD1P10809 573 aaKnown RBP21.25■□□□□ 0.99
COL27A1-207ENST00000494090 CFAP57Q96MR6 1250 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 E7EVH7 732 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 PSMC4P43686 418 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 LSG1Q9H089 658 aaKnown RBP21.25■□□□□ 0.99
COL27A1-207ENST00000494090 HAUS2Q9NVX0 235 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 ZMYM6O95789 1325 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 TMEM2Q9UHN6 1383 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 MRFAP1L1Q96HT8 127 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 SWAP70Q9UH65 585 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 ZNF521Q96K83 1311 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 NIM1KQ8IY84 436 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 KCNQ3O43525 872 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 ZNF365Q70YC5 407 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 PNMA2Q9UL42 364 aa21.25■□□□□ 0.99
COL27A1-207ENST00000494090 CTSWP56202 376 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 TRIM6Q9C030 488 aaPredicted RBP21.24■□□□□ 0.99
COL27A1-207ENST00000494090 NT5C3AQ9H0P0 336 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 BLZF1Q9H2G9 400 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 MYCLP12524 364 aaPredicted RBP21.24■□□□□ 0.99
COL27A1-207ENST00000494090 FLAD1Q8NFF5 587 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 RNF34Q969K3 372 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 IWS1Q96ST2 819 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 STIM2Q9P246 746 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 SERPINA10Q9UK55 444 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 HPDP32754 393 aaPredicted RBP21.24■□□□□ 0.99
COL27A1-207ENST00000494090 DYMQ7RTS9 669 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 RPGRIP1Q96KN7 1286 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 GMNNO75496 209 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 TFAP4Q01664 338 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 TRIML1Q8N9V2 468 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 SMC1BQ8NDV3 1235 aa21.24■□□□□ 0.99
COL27A1-207ENST00000494090 GOLGA6BA6NDN3 693 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 NDUFAB1O14561 156 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 RBM6P78332 1123 aaKnown RBP21.23■□□□□ 0.99
COL27A1-207ENST00000494090 ERVK-7P63135 1459 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 PAK2Q13177 524 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 TNFAIP1Q13829 316 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 CFAP221Q4G0U5 840 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 RUFY4Q6ZNE9 571 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 ADCY9O60503 1353 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 DLGAP5Q15398 846 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 SFMBT2Q5VUG0 894 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 CHURC1Q8WUH1 139 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 BCL2L12Q9HB09 334 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 BCRP11274 1271 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 RNASE9P60153 205 aaKnown RBP21.23■□□□□ 0.99
COL27A1-207ENST00000494090 KLHL30Q0D2K2 578 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 LONRF3Q496Y0 759 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 HACE1Q8IYU2 909 aa21.23■□□□□ 0.99
COL27A1-207ENST00000494090 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
COL27A1-207ENST00000494090 FLOT1O75955 427 aa21.22■□□□□ 0.99
COL27A1-207ENST00000494090 SYCE1Q8N0S2 351 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms