RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 PSMC4P43686 418 aa21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 CAP1Q01518 475 aa21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 SEPT2Q15019 361 aa21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 PLEKHM2Q8IWE5 1019 aa21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 SEC62Q99442 399 aaKnown RBP21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 ARHGAP39Q9C0H5 1083 aa21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 MYH8P13535 1937 aa21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
GTF3C2-212ENST00000493511 HOXD10P28358 340 aa21.54■■□□□ 1.04
GTF3C2-212ENST00000493511 GUCY1A2P33402 732 aa21.54■■□□□ 1.04
GTF3C2-212ENST00000493511 PRMT2P55345 433 aa21.54■■□□□ 1.04
GTF3C2-212ENST00000493511 FCGRTP55899 365 aa21.54■■□□□ 1.04
GTF3C2-212ENST00000493511 C12orf42Q96LP6 360 aa21.54■■□□□ 1.04
GTF3C2-212ENST00000493511 EPB41L4AQ9HCS5 686 aaPredicted RBP21.54■■□□□ 1.04
GTF3C2-212ENST00000493511 EMILIN3Q9NT22 766 aa21.54■■□□□ 1.04
GTF3C2-212ENST00000493511 MINDY4BA8MYZ0 360 aa21.53■■□□□ 1.04
GTF3C2-212ENST00000493511 FAM110CQ1W6H9 321 aa21.53■■□□□ 1.04
GTF3C2-212ENST00000493511 IFNL3Q8IZI9 196 aa21.53■■□□□ 1.04
GTF3C2-212ENST00000493511 ANKRD13CQ8N6S4 541 aa21.53■■□□□ 1.04
GTF3C2-212ENST00000493511 ACER1Q8TDN7 264 aa21.53■■□□□ 1.04
GTF3C2-212ENST00000493511 TRIM47Q96LD4 638 aa21.53■■□□□ 1.04
GTF3C2-212ENST00000493511 ZNF287Q9HBT7 754 aa21.53■■□□□ 1.04
GTF3C2-212ENST00000493511 HELLSQ9NRZ9 838 aa21.53■■□□□ 1.04
GTF3C2-212ENST00000493511 ROBO3Q96MS0 1386 aa21.52■■□□□ 1.04
GTF3C2-212ENST00000493511 AKR1B1P15121 316 aa21.52■■□□□ 1.04
GTF3C2-212ENST00000493511 ZYXQ15942 572 aaKnown RBP21.52■■□□□ 1.04
GTF3C2-212ENST00000493511 RILPL2Q969X0 211 aa21.52■■□□□ 1.04
GTF3C2-212ENST00000493511 SMIM22K7EJ46 135 aa21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 ECM2O94769 699 aaPredicted RBP21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 ICA1Q05084 483 aa21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 GTF3C2Q8WUA4 911 aaPredicted RBP21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 NAPBQ9H115 298 aa21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 SH2D4AQ9H788 454 aa21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 MKNK2Q9HBH9 465 aa21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 ARHGEF10LQ9HCE6 1279 aa21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 SRRDQ9UH36 339 aa21.51■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L15C9J2P7 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L13C9JLJ4 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L11C9JVI0 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L18D6R9N7 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L22D6RA61 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L17D6RBQ6 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L19D6RCP7 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L20D6RJB6 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 VCAM1P19320 739 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 CTGFP29279 349 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 HERVK_113P62684 666 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 USP17L24Q0WX57 530 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 NBPF11Q86T75 865 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 KANSL2Q9H9L4 492 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 PTCH2Q9Y6C5 1203 aa21.5■■□□□ 1.03
GTF3C2-212ENST00000493511 SLC3A2P08195 630 aaKnown RBP21.49■■□□□ 1.03
GTF3C2-212ENST00000493511 SLC9C1Q4G0N8 1177 aa21.49■■□□□ 1.03
GTF3C2-212ENST00000493511 MCMDC2Q4G0Z9 681 aa21.49■■□□□ 1.03
GTF3C2-212ENST00000493511 P2RX7Q99572 595 aaKnown RBP21.49■■□□□ 1.03
GTF3C2-212ENST00000493511 BRCA2P51587 3418 aa21.48■■□□□ 1.03
GTF3C2-212ENST00000493511 ZSWIM8A7E2V4 1837 aa21.48■■□□□ 1.03
GTF3C2-212ENST00000493511 TNPO2O14787 897 aaKnown RBP21.48■■□□□ 1.03
GTF3C2-212ENST00000493511 CCDC129Q6ZRS4 1044 aa21.48■■□□□ 1.03
GTF3C2-212ENST00000493511 ARMC5Q96C12 935 aa21.48■■□□□ 1.03
GTF3C2-212ENST00000493511 FAM227BQ96M60 508 aa21.48■■□□□ 1.03
GTF3C2-212ENST00000493511 MYPNQ86TC9 1320 aa21.48■■□□□ 1.03
GTF3C2-212ENST00000493511 KIAA0100Q14667 2235 aaKnown RBP21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 A0A1W2PRG0 241 aa21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 RASA1P20936 1047 aa21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 PDE4BQ07343 736 aa21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 RAET1EQ8TD07 263 aa21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 LPAR1Q92633 364 aa21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 COA7Q96BR5 231 aa21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 MORF4L1Q9UBU8 362 aa21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 TMX2Q9Y320 296 aa21.47■■□□□ 1.03
GTF3C2-212ENST00000493511 A0A0D9SFI3 127 aa21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 HIP1O00291 1037 aa21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 MFAP1P55081 439 aaKnown RBP21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 SOX10P56693 466 aa21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 PPARAQ07869 468 aa21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 CATSPERGQ6ZRH7 1159 aa21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 ZNF444Q8N0Y2 327 aaPredicted RBP21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 STK11IPQ8N1F8 1099 aa21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 GPRC5AQ8NFJ5 357 aa21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 RPAP3Q9H6T3 665 aaPredicted RBP21.46■■□□□ 1.03
GTF3C2-212ENST00000493511 MGAMO43451 1857 aa21.45■■□□□ 1.02
GTF3C2-212ENST00000493511 SDSP20132 328 aa21.45■■□□□ 1.02
GTF3C2-212ENST00000493511 RGS19P49795 217 aa21.45■■□□□ 1.02
GTF3C2-212ENST00000493511 ATP2B2Q01814 1243 aa21.45■■□□□ 1.02
GTF3C2-212ENST00000493511 PRKCZQ05513 592 aa21.45■■□□□ 1.02
GTF3C2-212ENST00000493511 NMIQ13287 307 aaPredicted RBP21.45■■□□□ 1.02
GTF3C2-212ENST00000493511 CLEC10AQ8IUN9 316 aa21.45■■□□□ 1.02
GTF3C2-212ENST00000493511 SIAH1Q8IUQ4 282 aa21.45■■□□□ 1.02
GTF3C2-212ENST00000493511 FOXP2O15409 715 aa21.44■■□□□ 1.02
GTF3C2-212ENST00000493511 EEF2P13639 858 aaKnown RBP21.44■■□□□ 1.02
GTF3C2-212ENST00000493511 ALX1Q15699 326 aa21.44■■□□□ 1.02
GTF3C2-212ENST00000493511 ZNF333Q96JL9 665 aa21.44■■□□□ 1.02
GTF3C2-212ENST00000493511 VCPKMTQ9H867 229 aa21.44■■□□□ 1.02
GTF3C2-212ENST00000493511 DIAPH3Q9NSV4 1193 aa21.44■■□□□ 1.02
GTF3C2-212ENST00000493511 PRDM1O75626 825 aa21.43■■□□□ 1.02
GTF3C2-212ENST00000493511 PDE4AP27815 886 aa21.43■■□□□ 1.02
GTF3C2-212ENST00000493511 ERVK-9P63128 1117 aa21.43■■□□□ 1.02
GTF3C2-212ENST00000493511 ERVK-24P63145 666 aa21.43■■□□□ 1.02
GTF3C2-212ENST00000493511 VPS53Q5VIR6 699 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms