RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 NYAP2Q9P242 653 aa13.6□□□□□ -0.23
LSM2-214ENST00000493387 SYNPO2Q9UMS6 1093 aa13.6□□□□□ -0.23
LSM2-214ENST00000493387 FZD1Q9UP38 647 aa13.6□□□□□ -0.23
LSM2-214ENST00000493387 SNCAIPQ9Y6H5 919 aa13.6□□□□□ -0.23
LSM2-214ENST00000493387 TLL2Q9Y6L7 1015 aa13.6□□□□□ -0.23
LSM2-214ENST00000493387 SPDYE5A6NIY4 337 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 PRC1O43663 620 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 TTLL1O95922 423 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 RPS6KB1P23443 525 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 GUCY1A2P33402 732 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 ICA1Q05084 483 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 PPATQ06203 517 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 SAPCD2Q86UD0 394 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 ANKS1AQ92625 1134 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 WDR18Q9BV38 432 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.59□□□□□ -0.23
LSM2-214ENST00000493387 MTMR4Q9NYA4 1195 aa13.59□□□□□ -0.23
LSM2-214ENST00000493387 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
LSM2-214ENST00000493387 MYH8P13535 1937 aa13.58□□□□□ -0.23
LSM2-214ENST00000493387 IFIT3O14879 490 aaKnown RBP13.58□□□□□ -0.24
LSM2-214ENST00000493387 NOVP48745 357 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 FGD1P98174 961 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 EXOSC10Q01780 885 aaKnown RBP13.58□□□□□ -0.24
LSM2-214ENST00000493387 RABEP1Q15276 862 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 TMEM67Q5HYA8 995 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 RGMBQ6NW40 437 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 CYB5R4Q7L1T6 521 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 FBXL16Q8N461 479 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 MKL1Q969V6 931 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 ELP3Q9H9T3 547 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 IL17RBQ9NRM6 502 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 ZHX2Q9Y6X8 837 aa13.58□□□□□ -0.24
LSM2-214ENST00000493387 C19orf81C9J6K1 198 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 CXCL11O14625 94 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 TOP1P11387 765 aaKnown RBP13.57□□□□□ -0.24
LSM2-214ENST00000493387 LIFRP42702 1097 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 ANTXR2P58335 489 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 JAG1P78504 1218 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 PPIL2Q13356 520 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 WTAPQ15007 396 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 ANKRD1Q15327 319 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 ZNF280CQ8ND82 737 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 CCDC102AQ96A19 550 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 CLMNQ96JQ2 1002 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 ALDH8A1Q9H2A2 487 aaPredicted RBP13.57□□□□□ -0.24
LSM2-214ENST00000493387 PDRG1Q9NUG6 133 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 TNKSO95271 1327 aa13.57□□□□□ -0.24
LSM2-214ENST00000493387 USP17L10C9JJH3 530 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 ZBTB48P10074 688 aaPredicted RBP13.56□□□□□ -0.24
LSM2-214ENST00000493387 EEF2P13639 858 aaKnown RBP13.56□□□□□ -0.24
LSM2-214ENST00000493387 ZNF157P51786 506 aaPredicted RBP13.56□□□□□ -0.24
LSM2-214ENST00000493387 USP14P54578 494 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 ATP2B2Q01814 1243 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 SEC23AQ15436 765 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 IFIT1BQ5T764 474 aaKnown RBP13.56□□□□□ -0.24
LSM2-214ENST00000493387 ENAHQ8N8S7 591 aaPredicted RBP13.56□□□□□ -0.24
LSM2-214ENST00000493387 IGDCC4Q8TDY8 1250 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 KIF2CQ99661 725 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 FEZ1Q99689 392 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 ZKSCAN3Q9BRR0 538 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 KIAA1683Q9H0B3 1180 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 CLIP2Q9UDT6 1046 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 STX8Q9UNK0 236 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 TMX2Q9Y320 296 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 DOCK1Q14185 1865 aa13.56□□□□□ -0.24
LSM2-214ENST00000493387 SH2B2O14492 632 aaPredicted RBP13.55□□□□□ -0.24
LSM2-214ENST00000493387 NMT2O60551 498 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 NEK4P51957 841 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 BACE1P56817 501 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 SPP2Q13103 211 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 SHROOM1Q2M3G4 852 aaPredicted RBP13.55□□□□□ -0.24
LSM2-214ENST00000493387 SPRYD7Q5W111 196 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 CHST3Q7LGC8 479 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 NKX2-3Q8TAU0 364 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 WNK4Q96J92 1243 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
LSM2-214ENST00000493387 KAT14Q9H8E8 782 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 GOPCQ9HD26 462 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
LSM2-214ENST00000493387 CCDC69A6NI79 296 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 ST18O60284 1047 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 CPA1P15085 419 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 ECE1P42892 770 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 GTF2A2P52657 109 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 C1QTNF8P60827 252 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 SNAPC2Q13487 334 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 RCSD1Q6JBY9 416 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 USP17L2Q6R6M4 530 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 Q6ZUG5 572 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 SGMS1Q86VZ5 419 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms