RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 F8W031 263 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-216ENST00000492977 RASA1P20936 1047 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 KIF5BP33176 963 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 CDK8P49336 464 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
PTPN7-216ENST00000492977 STK38Q15208 465 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 ANO1Q5XXA6 986 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 CCDC82Q8N4S0 544 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 ANP32BQ92688 251 aaKnown RBP16.25■□□□□ 0.19
PTPN7-216ENST00000492977 NUP62CLQ9H1M0 184 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 FOXP1Q9H334 677 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-216ENST00000492977 DACT1Q9NYF0 836 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 ECE2O60344 883 aa16.24■□□□□ 0.19
PTPN7-216ENST00000492977 ME1P48163 572 aa16.24■□□□□ 0.19
PTPN7-216ENST00000492977 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
PTPN7-216ENST00000492977 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
PTPN7-216ENST00000492977 CMTR1Q8N1G2 835 aaKnown RBP16.24■□□□□ 0.19
PTPN7-216ENST00000492977 SNED1Q8TER0 1413 aa16.24■□□□□ 0.19
PTPN7-216ENST00000492977 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
PTPN7-216ENST00000492977 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
PTPN7-216ENST00000492977 CLIC4Q9Y696 253 aa16.24■□□□□ 0.19
PTPN7-216ENST00000492977 A0A1W2PQ27 194 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 A0A1W2PQ64 194 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 A0A1W2PQD8 194 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 USP17L3A6NCW0 530 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 USP17L4A6NCW7 530 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 UBE2Q2LH0YL09 131 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 SPTLC2O15270 562 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 PLEKHA8P1O95397 391 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 MAP3K11Q16584 847 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 DACT2Q5SW24 774 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 USP17L1Q7RTZ2 530 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 NOSTRINQ8IVI9 506 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 CCAR1Q8IX12 1150 aaKnown RBP16.23■□□□□ 0.19
PTPN7-216ENST00000492977 SLC44A5Q8NCS7 719 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 NEDD1Q8NHV4 660 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 ZDHHC15Q96MV8 337 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-216ENST00000492977 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
PTPN7-216ENST00000492977 NR1I2O75469 434 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 WDHD1O75717 1129 aaPredicted RBP16.22■□□□□ 0.19
PTPN7-216ENST00000492977 GNAQP50148 359 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 SCNN1DP51172 638 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 SLC39A14Q15043 492 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 SF3A1Q15459 793 aaKnown RBP16.22■□□□□ 0.19
PTPN7-216ENST00000492977 PKN1Q16512 942 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 APOBEC3HQ6NTF7 200 aaKnown RBP16.22■□□□□ 0.19
PTPN7-216ENST00000492977 CCDC125Q86Z20 511 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 PNMA1Q8ND90 353 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 FUCA2Q9BTY2 467 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 TNMDQ9H2S6 317 aa16.22■□□□□ 0.19
PTPN7-216ENST00000492977 V9GY48 417 aaPredicted RBP16.22■□□□□ 0.19
PTPN7-216ENST00000492977 CRKP46108 304 aa16.21■□□□□ 0.19
PTPN7-216ENST00000492977 CDC42EP5Q6NZY7 148 aa16.21■□□□□ 0.19
PTPN7-216ENST00000492977 CCDC73Q6ZRK6 1079 aa16.21■□□□□ 0.19
PTPN7-216ENST00000492977 RBM43Q6ZSC3 357 aaKnown RBP16.21■□□□□ 0.19
PTPN7-216ENST00000492977 DIS3L2Q8IYB7 885 aaKnown RBP16.21■□□□□ 0.19
PTPN7-216ENST00000492977 RTKN2Q8IZC4 609 aa16.21■□□□□ 0.19
PTPN7-216ENST00000492977 SRBD1Q8N5C6 995 aaKnown RBP16.21■□□□□ 0.19
PTPN7-216ENST00000492977 KCNQ5Q9NR82 932 aa16.21■□□□□ 0.19
PTPN7-216ENST00000492977 CNTNAP5Q8WYK1 1306 aa16.21■□□□□ 0.19
PTPN7-216ENST00000492977 BTBD18B2RXH4 712 aa16.21■□□□□ 0.18
PTPN7-216ENST00000492977 CCDC192P0DO97 292 aa16.21■□□□□ 0.18
PTPN7-216ENST00000492977 GABPAQ06546 454 aa16.21■□□□□ 0.18
PTPN7-216ENST00000492977 GRM4Q14833 912 aa16.21■□□□□ 0.18
PTPN7-216ENST00000492977 AOC3Q16853 763 aa16.21■□□□□ 0.18
PTPN7-216ENST00000492977 JMYQ8N9B5 988 aa16.21■□□□□ 0.18
PTPN7-216ENST00000492977 KCNJ14Q9UNX9 436 aa16.21■□□□□ 0.18
PTPN7-216ENST00000492977 SCN9AQ15858 1988 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 CTAGE5O15320 804 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 C21orf2O43822 256 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 PPP6R2O75170 966 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 FAM160A1Q05DH4 1040 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 CCDC173Q0VFZ6 552 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 PICALMQ13492 652 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 UVSSAQ2YD98 709 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 CCDC93Q567U6 631 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 ENGASEQ8NFI3 743 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 MRPS27Q92552 414 aaKnown RBP16.2■□□□□ 0.18
PTPN7-216ENST00000492977 RNF25Q96BH1 459 aaPredicted RBP16.2■□□□□ 0.18
PTPN7-216ENST00000492977 TMEM47Q9BQJ4 181 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 PHF20Q9BVI0 1012 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 DDX4Q9NQI0 724 aaKnown RBP16.2■□□□□ 0.18
PTPN7-216ENST00000492977 SWAP70Q9UH65 585 aa16.2■□□□□ 0.18
PTPN7-216ENST00000492977 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 ZNF646O15015 1829 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-216ENST00000492977 PLIN4Q96Q06 1357 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 NOVP48745 357 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 SNW1Q13573 536 aaKnown RBP16.19■□□□□ 0.18
PTPN7-216ENST00000492977 RILPL1Q5EBL4 403 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 HS6ST3Q8IZP7 471 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 FSIP1Q8NA03 581 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 PSMD1Q99460 953 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 LZTS2Q9BRK4 669 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 OSBPL5Q9H0X9 879 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-216ENST00000492977 GOLPH3LQ9H4A5 285 aa16.19■□□□□ 0.18
PTPN7-216ENST00000492977 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
PTPN7-216ENST00000492977 SERPINA10Q9UK55 444 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms