RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 POTEEQ6S8J3 1075 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 STRBPQ96SI9 672 aaKnown RBP14.19□□□□□ -0.14
MDC1-207ENST00000492462 P2RX7Q99572 595 aaKnown RBP14.19□□□□□ -0.14
MDC1-207ENST00000492462 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 MPHOSPH10O00566 681 aaKnown RBP14.18□□□□□ -0.14
MDC1-207ENST00000492462 FCGRTP55899 365 aa14.18□□□□□ -0.14
MDC1-207ENST00000492462 USP17L2Q6R6M4 530 aa14.18□□□□□ -0.14
MDC1-207ENST00000492462 APPBP2Q92624 585 aa14.18□□□□□ -0.14
MDC1-207ENST00000492462 SEC62Q99442 399 aaKnown RBP14.18□□□□□ -0.14
MDC1-207ENST00000492462 FEZ1Q99689 392 aa14.18□□□□□ -0.14
MDC1-207ENST00000492462 SUPT16HQ9Y5B9 1047 aaKnown RBP14.18□□□□□ -0.14
MDC1-207ENST00000492462 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 GSG1L2A8MUP6 293 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 GLRX3O76003 335 aaKnown RBP14.17□□□□□ -0.14
MDC1-207ENST00000492462 IGHDP01880 384 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 AKR1B1P15121 316 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 HOXA7P31268 230 aaPredicted RBP14.17□□□□□ -0.14
MDC1-207ENST00000492462 CDK8P49336 464 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 PRMT2P55345 433 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 IRX3P78415 501 aaPredicted RBP14.17□□□□□ -0.14
MDC1-207ENST00000492462 PABPC4Q13310 644 aaKnown RBP eCLIP14.17□□□□□ -0.14
MDC1-207ENST00000492462 FAM110CQ1W6H9 321 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 CTR9Q6PD62 1173 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 TXNRD2Q9NNW7 524 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 CABP5Q9NP86 173 aa14.17□□□□□ -0.14
MDC1-207ENST00000492462 TNPO2O14787 897 aaKnown RBP14.16□□□□□ -0.14
MDC1-207ENST00000492462 ERC2O15083 957 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 GPAA1O43292 621 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 EN2P19622 333 aaPredicted RBP14.16□□□□□ -0.14
MDC1-207ENST00000492462 HOXD10P28358 340 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 GCLCP48506 637 aaPredicted RBP14.16□□□□□ -0.14
MDC1-207ENST00000492462 FLT3LGP49771 235 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 HERVK_113P62684 666 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 MTFR1Q15390 333 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 B4GALNT3Q6L9W6 998 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 SIAH1Q8IUQ4 282 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 RAET1EQ8TD07 263 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 C12orf42Q96LP6 360 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 FSD1Q9BTV5 496 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 KIAA1683Q9H0B3 1180 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 EPB41L4AQ9HCS5 686 aaPredicted RBP14.16□□□□□ -0.14
MDC1-207ENST00000492462 SWAP70Q9UH65 585 aa14.16□□□□□ -0.14
MDC1-207ENST00000492462 PLXNB2O15031 1838 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 ZFYP08048 801 aaPredicted RBP14.15□□□□□ -0.14
MDC1-207ENST00000492462 VCAM1P19320 739 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 GRK4P32298 578 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 PDE1AP54750 535 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 KIAA1755Q5JYT7 1200 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 C16orf86Q6ZW13 317 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 NBPF11Q86T75 865 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 SMC5Q8IY18 1101 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 STK11IPQ8N1F8 1099 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 LNPKQ9C0E8 428 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 RBPJLQ9UBG7 517 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 MORF4L1Q9UBU8 362 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 STAP2Q9UGK3 403 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 UNC80Q8N2C7 3258 aa14.15□□□□□ -0.14
MDC1-207ENST00000492462 ELNP15502 786 aa14.14□□□□□ -0.15
MDC1-207ENST00000492462 IRX6P78412 446 aaPredicted RBP14.14□□□□□ -0.15
MDC1-207ENST00000492462 Q3C1V9 767 aa14.14□□□□□ -0.15
MDC1-207ENST00000492462 ZMYM1Q5SVZ6 1142 aa14.14□□□□□ -0.15
MDC1-207ENST00000492462 TMEM179Q6ZVK1 233 aa14.14□□□□□ -0.15
MDC1-207ENST00000492462 DDRGK1Q96HY6 314 aa14.14□□□□□ -0.15
MDC1-207ENST00000492462 ZBTB47Q9UFB7 747 aaPredicted RBP14.14□□□□□ -0.15
MDC1-207ENST00000492462 RLFQ13129 1914 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 MINDY4BA8MYZ0 360 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L15C9J2P7 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L13C9JLJ4 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L11C9JVI0 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L18D6R9N7 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L22D6RA61 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L17D6RBQ6 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L19D6RCP7 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L20D6RJB6 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 CNMDO75829 334 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP14P54578 494 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 USP17L24Q0WX57 530 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 AAMPQ13685 434 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 CATSPERGQ6ZRH7 1159 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 CCDC129Q6ZRS4 1044 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 AMOTL1Q8IY63 956 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 PAGR1Q9BTK6 254 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.13□□□□□ -0.15
MDC1-207ENST00000492462 TMEM106CQ9BVX2 250 aa14.13□□□□□ -0.15
MDC1-207ENST00000492462 RWDD1Q9H446 243 aaPredicted RBP14.13□□□□□ -0.15
MDC1-207ENST00000492462 ARPP21Q9UBL0 812 aaPredicted RBP14.13□□□□□ -0.15
MDC1-207ENST00000492462 GREB1LQ9C091 1923 aaPredicted RBP14.13□□□□□ -0.15
MDC1-207ENST00000492462 ADCY3O60266 1144 aa14.12□□□□□ -0.15
MDC1-207ENST00000492462 RASA1P20936 1047 aa14.12□□□□□ -0.15
MDC1-207ENST00000492462 SBK1Q52WX2 424 aa14.12□□□□□ -0.15
MDC1-207ENST00000492462 GPRC5AQ8NFJ5 357 aa14.12□□□□□ -0.15
MDC1-207ENST00000492462 COA7Q96BR5 231 aa14.12□□□□□ -0.15
MDC1-207ENST00000492462 PORCNQ9H237 461 aa14.12□□□□□ -0.15
MDC1-207ENST00000492462 RPAP3Q9H6T3 665 aaPredicted RBP14.12□□□□□ -0.15
MDC1-207ENST00000492462 GJD2Q9UKL4 321 aa14.12□□□□□ -0.15
MDC1-207ENST00000492462 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
MDC1-207ENST00000492462 PATL2C9JE40 543 aaKnown RBP14.11□□□□□ -0.15
MDC1-207ENST00000492462 FOXP2O15409 715 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 APPP05067 770 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms