RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 HAUS7Q99871 368 aa10.03□□□□□ -0.8
APP-216ENST00000491395 HTATIP2Q9BUP3 242 aa10.03□□□□□ -0.8
APP-216ENST00000491395 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.03□□□□□ -0.8
APP-216ENST00000491395 PORCNQ9H237 461 aa10.03□□□□□ -0.8
APP-216ENST00000491395 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
APP-216ENST00000491395 DCP1AQ9NPI6 582 aaPredicted RBP10.03□□□□□ -0.8
APP-216ENST00000491395 PAG1Q9NWQ8 432 aa10.03□□□□□ -0.8
APP-216ENST00000491395 DAXXQ9UER7 740 aaPredicted RBP10.03□□□□□ -0.8
APP-216ENST00000491395 RBBP6Q7Z6E9 1792 aaKnown RBP10.03□□□□□ -0.8
APP-216ENST00000491395 SIPA1L1O43166 1804 aa10.03□□□□□ -0.8
APP-216ENST00000491395 MKI67P46013 3256 aaKnown RBP10.02□□□□□ -0.8
APP-216ENST00000491395 SMIM22K7EJ46 135 aa10.02□□□□□ -0.81
APP-216ENST00000491395 MPHOSPH10O00566 681 aaKnown RBP10.02□□□□□ -0.81
APP-216ENST00000491395 CNMDO75829 334 aa10.02□□□□□ -0.81
APP-216ENST00000491395 MBD4O95243 580 aa10.02□□□□□ -0.81
APP-216ENST00000491395 MAPK4P31152 587 aa10.02□□□□□ -0.81
APP-216ENST00000491395 ADD2P35612 726 aa10.02□□□□□ -0.81
APP-216ENST00000491395 USP14P54578 494 aa10.02□□□□□ -0.81
APP-216ENST00000491395 ERVK-9P63128 1117 aa10.02□□□□□ -0.81
APP-216ENST00000491395 ERVK-24P63145 666 aa10.02□□□□□ -0.81
APP-216ENST00000491395 CATSPERGQ6ZRH7 1159 aa10.02□□□□□ -0.81
APP-216ENST00000491395 CCAR1Q8IX12 1150 aaKnown RBP10.02□□□□□ -0.81
APP-216ENST00000491395 SLC44A5Q8NCS7 719 aa10.02□□□□□ -0.81
APP-216ENST00000491395 TRIB2Q92519 343 aa10.02□□□□□ -0.81
APP-216ENST00000491395 DYNLL2Q96FJ2 89 aa10.02□□□□□ -0.81
APP-216ENST00000491395 NUDT12Q9BQG2 462 aa10.02□□□□□ -0.81
APP-216ENST00000491395 LRRCC1Q9C099 1032 aa10.02□□□□□ -0.81
APP-216ENST00000491395 KIAA1683Q9H0B3 1180 aa10.02□□□□□ -0.81
APP-216ENST00000491395 CRISPLD2Q9H0B8 497 aa10.02□□□□□ -0.81
APP-216ENST00000491395 MAST2Q6P0Q8 1798 aa10.01□□□□□ -0.81
APP-216ENST00000491395 TRIOBPQ9H2D6 2365 aa10.01□□□□□ -0.81
APP-216ENST00000491395 CYP2D7A0A087X1C5 515 aa10.01□□□□□ -0.81
APP-216ENST00000491395 A0A1W2PRG0 241 aa10.01□□□□□ -0.81
APP-216ENST00000491395 VCAM1P19320 739 aa10.01□□□□□ -0.81
APP-216ENST00000491395 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
APP-216ENST00000491395 GPR142Q7Z601 462 aa10.01□□□□□ -0.81
APP-216ENST00000491395 PLEKHH3Q7Z736 793 aa10.01□□□□□ -0.81
APP-216ENST00000491395 DIS3LQ8TF46 1054 aaKnown RBP10.01□□□□□ -0.81
APP-216ENST00000491395 GTF3C2Q8WUA4 911 aaPredicted RBP10.01□□□□□ -0.81
APP-216ENST00000491395 USP6NLQ92738 828 aa10.01□□□□□ -0.81
APP-216ENST00000491395 PAWRQ96IZ0 340 aaKnown RBP10.01□□□□□ -0.81
APP-216ENST00000491395 RPAP3Q9H6T3 665 aaPredicted RBP10.01□□□□□ -0.81
APP-216ENST00000491395 HMX1Q9NP08 348 aaPredicted RBP10.01□□□□□ -0.81
APP-216ENST00000491395 RABGAP1Q9Y3P9 1069 aa10.01□□□□□ -0.81
APP-216ENST00000491395 PTPRFP10586 1907 aa10.01□□□□□ -0.81
APP-216ENST00000491395 RPTORQ8N122 1335 aa10.01□□□□□ -0.81
APP-216ENST00000491395 BRCA2P51587 3418 aa10.01□□□□□ -0.81
APP-216ENST00000491395 MYO5AQ9Y4I1 1855 aaKnown RBP10□□□□□ -0.81
APP-216ENST00000491395 XRCC5P13010 732 aaKnown RBP10□□□□□ -0.81
APP-216ENST00000491395 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
APP-216ENST00000491395 AKR1B1P15121 316 aa10□□□□□ -0.81
APP-216ENST00000491395 FXR1P51114 621 aaKnown RBP eCLIP10□□□□□ -0.81
APP-216ENST00000491395 CCL14Q16627 93 aa10□□□□□ -0.81
APP-216ENST00000491395 MORN1Q5T089 497 aa10□□□□□ -0.81
APP-216ENST00000491395 CLEC10AQ8IUN9 316 aa10□□□□□ -0.81
APP-216ENST00000491395 SOCS4Q8WXH5 440 aa10□□□□□ -0.81
APP-216ENST00000491395 DDX24Q9GZR7 859 aaKnown RBP eCLIP10□□□□□ -0.81
APP-216ENST00000491395 CWC22Q9HCG8 908 aaKnown RBP10□□□□□ -0.81
APP-216ENST00000491395 BTBD7Q9P203 1132 aa10□□□□□ -0.81
APP-216ENST00000491395 NR2E3Q9Y5X4 410 aa10□□□□□ -0.81
APP-216ENST00000491395 LOC285556D6RIA3 1793 aa9.99□□□□□ -0.81
APP-216ENST00000491395 USP17L12C9JPN9 530 aa9.99□□□□□ -0.81
APP-216ENST00000491395 USP17L21D6R901 530 aa9.99□□□□□ -0.81
APP-216ENST00000491395 EVI5O60447 810 aa9.99□□□□□ -0.81
APP-216ENST00000491395 ZKSCAN1P17029 563 aaPredicted RBP9.99□□□□□ -0.81
APP-216ENST00000491395 CAPN2P17655 700 aa9.99□□□□□ -0.81
APP-216ENST00000491395 RGS2P41220 211 aa9.99□□□□□ -0.81
APP-216ENST00000491395 CACNB2Q08289 660 aaPredicted RBP9.99□□□□□ -0.81
APP-216ENST00000491395 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
APP-216ENST00000491395 UBE3CQ15386 1083 aa9.99□□□□□ -0.81
APP-216ENST00000491395 KIAA1755Q5JYT7 1200 aa9.99□□□□□ -0.81
APP-216ENST00000491395 MAP3K21Q5TCX8 1036 aa9.99□□□□□ -0.81
APP-216ENST00000491395 C12orf60Q5U649 245 aa9.99□□□□□ -0.81
APP-216ENST00000491395 WDR78Q5VTH9 848 aa9.99□□□□□ -0.81
APP-216ENST00000491395 NECAB2Q7Z6G3 386 aa9.99□□□□□ -0.81
APP-216ENST00000491395 SIAH1Q8IUQ4 282 aa9.99□□□□□ -0.81
APP-216ENST00000491395 PUS7LQ9H0K6 701 aaKnown RBP9.99□□□□□ -0.81
APP-216ENST00000491395 DCTPP1Q9H773 170 aa9.99□□□□□ -0.81
APP-216ENST00000491395 ATP8A2Q9NTI2 1148 aa9.99□□□□□ -0.81
APP-216ENST00000491395 ECHDC1Q9NTX5 307 aa9.99□□□□□ -0.81
APP-216ENST00000491395 PCDH10Q9P2E7 1040 aa9.99□□□□□ -0.81
APP-216ENST00000491395 SWAP70Q9UH65 585 aa9.99□□□□□ -0.81
APP-216ENST00000491395 SLC4A4Q9Y6R1 1079 aa9.99□□□□□ -0.81
APP-216ENST00000491395 SLC15A5A6NIM6 579 aa9.98□□□□□ -0.81
APP-216ENST00000491395 SPDYE16A6NNV3 312 aaPredicted RBP9.98□□□□□ -0.81
APP-216ENST00000491395 CCND3P30281 292 aaPredicted RBP9.98□□□□□ -0.81
APP-216ENST00000491395 CDK8P49336 464 aa9.98□□□□□ -0.81
APP-216ENST00000491395 MNX1P50219 401 aaPredicted RBP9.98□□□□□ -0.81
APP-216ENST00000491395 CCNA1P78396 465 aa9.98□□□□□ -0.81
APP-216ENST00000491395 COG2Q14746 738 aa9.98□□□□□ -0.81
APP-216ENST00000491395 TSHZ3Q63HK5 1081 aa9.98□□□□□ -0.81
APP-216ENST00000491395 ZSCAN25Q6NSZ9 544 aa9.98□□□□□ -0.81
APP-216ENST00000491395 LBX2Q6XYB7 198 aa9.98□□□□□ -0.81
APP-216ENST00000491395 TMEM179Q6ZVK1 233 aa9.98□□□□□ -0.81
APP-216ENST00000491395 TRMT44Q8IYL2 757 aaKnown RBP9.98□□□□□ -0.81
APP-216ENST00000491395 ANKLE1Q8NAG6 615 aa9.98□□□□□ -0.81
APP-216ENST00000491395 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
APP-216ENST00000491395 DOCK3Q8IZD9 2030 aa9.98□□□□□ -0.81
APP-216ENST00000491395 GLRX3O76003 335 aaKnown RBP9.97□□□□□ -0.81
APP-216ENST00000491395 PTPREP23469 700 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms