RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 OSBPL3Q9H4L5 887 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 ABCF2Q9UG63 623 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 MYH2Q9UKX2 1941 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 CIAO1O76071 339 aa10.4□□□□□ -0.74
HPS4-215ENST00000491142 GSPT1P15170 499 aaKnown RBP10.4□□□□□ -0.74
HPS4-215ENST00000491142 SLC4A3P48751 1232 aa10.4□□□□□ -0.74
HPS4-215ENST00000491142 RHBDL3P58872 404 aa10.4□□□□□ -0.74
HPS4-215ENST00000491142 PABPC4Q13310 644 aaKnown RBP eCLIP10.4□□□□□ -0.74
HPS4-215ENST00000491142 RASGRF1Q13972 1273 aa10.4□□□□□ -0.74
HPS4-215ENST00000491142 ZGPATQ8N5A5 531 aaKnown RBP10.4□□□□□ -0.74
HPS4-215ENST00000491142 ZNF384Q8TF68 577 aa10.4□□□□□ -0.74
HPS4-215ENST00000491142 OSBPL5Q9H0X9 879 aaPredicted RBP10.4□□□□□ -0.74
HPS4-215ENST00000491142 MORF4L1Q9UBU8 362 aa10.4□□□□□ -0.74
HPS4-215ENST00000491142 MROH7-TTC4A0A0A0MT08 1334 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 SALL3Q9BXA9 1300 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 GPR75-ASB3A0A0A6YYF3 556 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 CCND3P30281 292 aaPredicted RBP10.39□□□□□ -0.75
HPS4-215ENST00000491142 CAP2P40123 477 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 TIMM10P62072 90 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 MECOMQ03112 1051 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 CACNB2Q08289 660 aaPredicted RBP10.39□□□□□ -0.75
HPS4-215ENST00000491142 NBR1Q14596 966 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 SH3D19Q5HYK7 790 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 MAMSTRQ6ZN01 415 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 TBC1D9Q6ZT07 1266 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 SLF2Q8IX21 1173 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 P2RX7Q99572 595 aaKnown RBP10.39□□□□□ -0.75
HPS4-215ENST00000491142 TXNRD2Q9NNW7 524 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 PA2G4Q9UQ80 394 aaKnown RBP10.39□□□□□ -0.75
HPS4-215ENST00000491142 CDH23Q9H251 3354 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 PLXNB2O15031 1838 aa10.39□□□□□ -0.75
HPS4-215ENST00000491142 USP17L5A8MUK1 530 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 UBTFL1P0CB47 393 aaPredicted RBP10.38□□□□□ -0.75
HPS4-215ENST00000491142 XRCC5P13010 732 aaKnown RBP10.38□□□□□ -0.75
HPS4-215ENST00000491142 IL15P40933 162 aaPredicted RBP10.38□□□□□ -0.75
HPS4-215ENST00000491142 PSEN1P49768 467 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 JAG1P78504 1218 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 CCL14Q16627 93 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 Q3C1V9 767 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 SPTY2D1Q68D10 685 aaPredicted RBP10.38□□□□□ -0.75
HPS4-215ENST00000491142 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
HPS4-215ENST00000491142 SSH3Q8TE77 659 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 USP6NLQ92738 828 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 SNX21Q969T3 373 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 NUDT12Q9BQG2 462 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 TBC1D2Q9BYX2 928 aa10.38□□□□□ -0.75
HPS4-215ENST00000491142 LOC285556D6RIA3 1793 aa10.37□□□□□ -0.75
HPS4-215ENST00000491142 ZKSCAN1P17029 563 aaPredicted RBP10.37□□□□□ -0.75
HPS4-215ENST00000491142 HERVK_113P62684 666 aa10.37□□□□□ -0.75
HPS4-215ENST00000491142 IRX5P78411 483 aaPredicted RBP10.37□□□□□ -0.75
HPS4-215ENST00000491142 IRX3P78415 501 aaPredicted RBP10.37□□□□□ -0.75
HPS4-215ENST00000491142 MTMR2Q13614 643 aa10.37□□□□□ -0.75
HPS4-215ENST00000491142 POTEEQ6S8J3 1075 aa10.37□□□□□ -0.75
HPS4-215ENST00000491142 GPRC5AQ8NFJ5 357 aa10.37□□□□□ -0.75
HPS4-215ENST00000491142 SOCS4Q8WXH5 440 aa10.37□□□□□ -0.75
HPS4-215ENST00000491142 PORCNQ9H237 461 aa10.37□□□□□ -0.75
HPS4-215ENST00000491142 RBPJLQ9UBG7 517 aa10.37□□□□□ -0.75
HPS4-215ENST00000491142 PNMA6EA0A0J9YXQ4 647 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
HPS4-215ENST00000491142 RAB11FIP3O75154 756 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 HOXA7P31268 230 aaPredicted RBP10.36□□□□□ -0.75
HPS4-215ENST00000491142 BACE1P56817 501 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 NFKBIBQ15653 356 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 SHROOM1Q2M3G4 852 aaPredicted RBP10.36□□□□□ -0.75
HPS4-215ENST00000491142 MORN1Q5T089 497 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 PI16Q6UXB8 463 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 NSUN4Q96CB9 384 aaKnown RBP10.36□□□□□ -0.75
HPS4-215ENST00000491142 XAGE2Q96GT9 111 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 LBHD1Q9BQE6 289 aaPredicted RBP10.36□□□□□ -0.75
HPS4-215ENST00000491142 WDR18Q9BV38 432 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 LRRCC1Q9C099 1032 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 SENP6Q9GZR1 1112 aaPredicted RBP10.36□□□□□ -0.75
HPS4-215ENST00000491142 ANTXR1Q9H6X2 564 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 AS3MTQ9HBK9 375 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 TMOD4Q9NZQ9 345 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 HDAC5Q9UQL6 1122 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.36□□□□□ -0.75
HPS4-215ENST00000491142 MUC3AQ02505 3323 aa10.36□□□□□ -0.75
HPS4-215ENST00000491142 COL2A1P02458 1487 aaPredicted RBP10.36□□□□□ -0.75
HPS4-215ENST00000491142 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
HPS4-215ENST00000491142 A0A1B0GUL7 405 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 PLCG2P16885 1265 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 MAPK4P31152 587 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 PDE1AP54750 535 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 ERVK-24P63145 666 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 PDAP1Q13442 181 aaKnown RBP10.35□□□□□ -0.75
HPS4-215ENST00000491142 MTX1Q13505 466 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 GPR142Q7Z601 462 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 TRMT44Q8IYL2 757 aaKnown RBP10.35□□□□□ -0.75
HPS4-215ENST00000491142 OTUD7AQ8TE49 926 aaPredicted RBP10.35□□□□□ -0.75
HPS4-215ENST00000491142 CDX2Q99626 313 aaPredicted RBP10.35□□□□□ -0.75
HPS4-215ENST00000491142 PAGR1Q9BTK6 254 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 COPRSQ9NQ92 184 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 HMG20BQ9P0W2 317 aa10.35□□□□□ -0.75
HPS4-215ENST00000491142 LDHCP07864 332 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 SDSP20132 328 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 RGS2P41220 211 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 TFCP2Q12800 502 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms