RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 KIF2CQ99661 725 aa18.99■□□□□ 0.63
CLIC4-203ENST00000489758 KANSL2Q9H9L4 492 aa18.99■□□□□ 0.63
CLIC4-203ENST00000489758 UPF2Q9HAU5 1272 aaKnown RBP18.99■□□□□ 0.63
CLIC4-203ENST00000489758 MTMR4Q9NYA4 1195 aa18.99■□□□□ 0.63
CLIC4-203ENST00000489758 RASSF10A6NK89 507 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 ICA1Q05084 483 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 PPATQ06203 517 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 WNK4Q96J92 1243 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 ZKSCAN3Q9BRR0 538 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 WDR18Q9BV38 432 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 TM6SF1Q9BZW5 370 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 ZSWIM6Q9HCJ5 1215 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.98■□□□□ 0.63
CLIC4-203ENST00000489758 AFG3L2Q9Y4W6 797 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 ZHX2Q9Y6X8 837 aa18.98■□□□□ 0.63
CLIC4-203ENST00000489758 GREB1LQ9C091 1923 aaPredicted RBP18.98■□□□□ 0.63
CLIC4-203ENST00000489758 DOCK1Q14185 1865 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 A0A1W2PRG0 241 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 FAM155AB1AL88 458 aaPredicted RBP18.97■□□□□ 0.63
CLIC4-203ENST00000489758 CPA1P15085 419 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 ZNF157P51786 506 aaPredicted RBP18.97■□□□□ 0.63
CLIC4-203ENST00000489758 EXOSC10Q01780 885 aaKnown RBP18.97■□□□□ 0.63
CLIC4-203ENST00000489758 PPIL2Q13356 520 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 COL13A1Q5TAT6 717 aaPredicted RBP18.97■□□□□ 0.63
CLIC4-203ENST00000489758 SPRYD7Q5W111 196 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 RCSD1Q6JBY9 416 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 CHST3Q7LGC8 479 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 ACER1Q8TDN7 264 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 OTUD5Q96G74 571 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 ZSCAN10Q96SZ4 725 aaPredicted RBP18.97■□□□□ 0.63
CLIC4-203ENST00000489758 TBC1D2Q9BYX2 928 aa18.97■□□□□ 0.63
CLIC4-203ENST00000489758 PRC1O43663 620 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 SLC10A3P09131 477 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 HMGB1P09429 215 aaKnown RBP18.96■□□□□ 0.63
CLIC4-203ENST00000489758 HSPA1AP0DMV8 641 aaKnown RBP18.96■□□□□ 0.63
CLIC4-203ENST00000489758 HSPA1BP0DMV9 641 aaKnown RBP18.96■□□□□ 0.63
CLIC4-203ENST00000489758 EEF2P13639 858 aaKnown RBP18.96■□□□□ 0.63
CLIC4-203ENST00000489758 CASTP20810 708 aaKnown RBP18.96■□□□□ 0.63
CLIC4-203ENST00000489758 PSMA5P28066 241 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 MCM5P33992 734 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 SEC23AQ15436 765 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 DHX32Q7L7V1 743 aaKnown RBP18.96■□□□□ 0.63
CLIC4-203ENST00000489758 IQCA1Q86XH1 822 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 ENAHQ8N8S7 591 aaPredicted RBP18.96■□□□□ 0.63
CLIC4-203ENST00000489758 ZNF280CQ8ND82 737 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 ANKS1AQ92625 1134 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 NYAP2Q9P242 653 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 WDR19Q8NEZ3 1342 aa18.96■□□□□ 0.63
CLIC4-203ENST00000489758 IRF6O14896 467 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 TTLL1O95922 423 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 RPS6KB1P23443 525 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 ECE1P42892 770 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 SPP2Q13103 211 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 BLOC1S2Q6QNY1 142 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 IGDCC4Q8TDY8 1250 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 MKL1Q969V6 931 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 UBAC1Q9BSL1 405 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 MTA3Q9BTC8 594 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 AS3MTQ9HBK9 375 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 KCNH4Q9UQ05 1017 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 TMX2Q9Y320 296 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 TNKSO95271 1327 aa18.95■□□□□ 0.62
CLIC4-203ENST00000489758 TRIM75PA6NK02 468 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 ZBTB48P10074 688 aaPredicted RBP18.94■□□□□ 0.62
CLIC4-203ENST00000489758 DEFB115Q30KQ5 88 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 RUFY3Q7L099 469 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 DGKHQ86XP1 1220 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 CCDC102AQ96A19 550 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 TCEANC2Q96MN5 208 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 TTC14Q96N46 770 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 UPF3BQ9BZI7 483 aaKnown RBP18.94■□□□□ 0.62
CLIC4-203ENST00000489758 KIAA1683Q9H0B3 1180 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 GPHNQ9NQX3 736 aaPredicted RBP18.94■□□□□ 0.62
CLIC4-203ENST00000489758 CLIP2Q9UDT6 1046 aa18.94■□□□□ 0.62
CLIC4-203ENST00000489758 SH2B2O14492 632 aaPredicted RBP18.93■□□□□ 0.62
CLIC4-203ENST00000489758 IFIT3O14879 490 aaKnown RBP18.93■□□□□ 0.62
CLIC4-203ENST00000489758 BACE1P56817 501 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 CCDC178Q5BJE1 867 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 PPP4R3BQ5MIZ7 849 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 CYP4F22Q6NT55 531 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 TMEM87BQ96K49 555 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 TMEM47Q9BQJ4 181 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 LRRC2Q9BYS8 371 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 SENP2Q9HC62 589 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 ARHGEF10LQ9HCE6 1279 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 SYNPO2Q9UMS6 1093 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 STX8Q9UNK0 236 aa18.93■□□□□ 0.62
CLIC4-203ENST00000489758 USP17L10C9JJH3 530 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 CXCL11O14625 94 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 ATP2B2Q01814 1243 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 MKRN3Q13064 507 aaKnown RBP18.92■□□□□ 0.62
CLIC4-203ENST00000489758 MTMR2Q13614 643 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 MOGSQ13724 837 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 TMEM67Q5HYA8 995 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 SH3D19Q5HYK7 790 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 KIAA1755Q5JYT7 1200 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 LRRC47Q8N1G4 583 aaKnown RBP18.92■□□□□ 0.62
CLIC4-203ENST00000489758 MS4A4AQ96JQ5 239 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 LY9Q9HBG7 655 aa18.92■□□□□ 0.62
CLIC4-203ENST00000489758 CYP46A1Q9Y6A2 500 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms