RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 CNGA4Q8IV77 575 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 IQUBQ8NA54 791 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 AK7Q96M32 723 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 GSDMAQ96QA5 445 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
NEB-215ENST00000489048 MROH5Q6ZUA9 1318 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 H3BQF6 201 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 MBD4O95243 580 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 BMP15O95972 392 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 CAPN2P17655 700 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 MAP3K12Q12852 859 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 DPYDQ12882 1025 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 RNF26Q9BY78 433 aaPredicted RBP12.47□□□□□ -0.41
NEB-215ENST00000489048 MYO1AQ9UBC5 1043 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 IL2RBP14784 551 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 CD44P16070 742 aaKnown RBP12.47□□□□□ -0.41
NEB-215ENST00000489048 RAD51AP2Q09MP3 1159 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 SPATA5Q8NB90 893 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 PAGE5Q96GU1 130 aa12.47□□□□□ -0.41
NEB-215ENST00000489048 ZCCHC17Q9NP64 241 aaKnown RBP12.47□□□□□ -0.41
NEB-215ENST00000489048 A0A087X0B3 334 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 TUBBP07437 444 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 FILIP1LQ4L180 1135 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 HDXQ7Z353 690 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 SYNE4Q8N205 404 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 FERMT2Q96AC1 680 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
NEB-215ENST00000489048 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.46□□□□□ -0.41
NEB-215ENST00000489048 LRRC10BA6NIK2 292 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 TRIM75PA6NK02 468 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 IRS4O14654 1257 aaPredicted RBP12.46□□□□□ -0.41
NEB-215ENST00000489048 PDE8AO60658 829 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 WHAMMP3Q1A5X7 153 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 TOM1L2Q6ZVM7 507 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 MAGEB6Q8N7X4 407 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 FANCBQ8NB91 859 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 GOLGA5Q8TBA6 731 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 NACAP1Q9BZK3 213 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 RNF41Q9H4P4 317 aaPredicted RBP12.46□□□□□ -0.41
NEB-215ENST00000489048 LIMA1Q9UHB6 759 aaKnown RBP12.46□□□□□ -0.41
NEB-215ENST00000489048 ADAM21Q9UKJ8 722 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.41
NEB-215ENST00000489048 ERICH2A1L162 156 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 ERLIN1O75477 346 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 GYPCP04921 128 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 TMTC1Q8IUR5 882 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 ZNF654Q8IZM8 581 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 SHISA4Q96DD7 197 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 PHF20Q9BVI0 1012 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 ARMT1Q9H993 441 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 LZTFL1Q9NQ48 299 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 L1RE1Q9UN81 338 aa12.46□□□□□ -0.42
NEB-215ENST00000489048 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 CTAGE9A4FU28 777 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 GTF2E1P29083 439 aaPredicted RBP12.45□□□□□ -0.42
NEB-215ENST00000489048 TRIM14Q14142 442 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 HLFQ16534 295 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 DNAJC10Q8IXB1 793 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 CABP5Q9NP86 173 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 STARD3NLO95772 234 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 SLC5A1P13866 664 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 RASGRF1Q13972 1273 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 SEC23AQ15436 765 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 ZSCAN26Q16670 478 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 ZNF569Q5MCW4 686 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 PNKPQ96T60 521 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 TMOD3Q9NYL9 352 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 CWC15Q9P013 229 aaKnown RBP12.45□□□□□ -0.42
NEB-215ENST00000489048 ANAPC4Q9UJX5 808 aa12.45□□□□□ -0.42
NEB-215ENST00000489048 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 A0A0U1RQJ8 604 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 RPS6KA5O75582 802 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 XBP1P17861 261 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 CASP14P31944 242 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 KRT2P35908 639 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 PKN1Q16512 942 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 ATRIPQ8WXE1 791 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 NAPGQ99747 312 aaPredicted RBP12.44□□□□□ -0.42
NEB-215ENST00000489048 GBP3Q9H0R5 595 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
NEB-215ENST00000489048 ARHGAP25P42331 645 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 FXR1P51114 621 aaKnown RBP eCLIP12.44□□□□□ -0.42
NEB-215ENST00000489048 PIP4K2BP78356 416 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 FUT2Q10981 343 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 SLC35F6Q8N357 371 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 LCORLQ8N3X6 602 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 SYMPKQ92797 1274 aaKnown RBP12.44□□□□□ -0.42
NEB-215ENST00000489048 TNFRSF25Q93038 417 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 EPSTI1Q96J88 318 aa12.44□□□□□ -0.42
NEB-215ENST00000489048 FEZ2Q9UHY8 353 aaPredicted RBP12.44□□□□□ -0.42
NEB-215ENST00000489048 MYH6P13533 1939 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 PRPF3O43395 683 aaKnown RBP12.43□□□□□ -0.42
NEB-215ENST00000489048 TDO2P48775 406 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms