RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SRRDQ9UH36 339 aa28.44■■■□□ 2.14
RNF38-208ENST00000488058 MYPNQ86TC9 1320 aa28.43■■■□□ 2.14
RNF38-208ENST00000488058 GSG1L2A8MUP6 293 aa28.43■■■□□ 2.14
RNF38-208ENST00000488058 APPP05067 770 aa28.43■■■□□ 2.14
RNF38-208ENST00000488058 GCLCP48506 637 aaPredicted RBP28.43■■■□□ 2.14
RNF38-208ENST00000488058 CDK8P49336 464 aa28.43■■■□□ 2.14
RNF38-208ENST00000488058 STK11IPQ8N1F8 1099 aa28.43■■■□□ 2.14
RNF38-208ENST00000488058 AKR1B1P15121 316 aa28.42■■■□□ 2.14
RNF38-208ENST00000488058 GNAT2P19087 354 aa28.42■■■□□ 2.14
RNF38-208ENST00000488058 USP14P54578 494 aa28.42■■■□□ 2.14
RNF38-208ENST00000488058 FAM110CQ1W6H9 321 aa28.42■■■□□ 2.14
RNF38-208ENST00000488058 TMEM179Q6ZVK1 233 aa28.42■■■□□ 2.14
RNF38-208ENST00000488058 RAET1EQ8TD07 263 aa28.42■■■□□ 2.14
RNF38-208ENST00000488058 TAOK2Q9UL54 1235 aa28.42■■■□□ 2.14
RNF38-208ENST00000488058 MINDY4BA8MYZ0 360 aa28.41■■■□□ 2.14
RNF38-208ENST00000488058 TNPO2O14787 897 aaKnown RBP28.41■■■□□ 2.14
RNF38-208ENST00000488058 HOXA7P31268 230 aaPredicted RBP28.41■■■□□ 2.14
RNF38-208ENST00000488058 TDO2P48775 406 aa28.41■■■□□ 2.14
RNF38-208ENST00000488058 C16orf86Q6ZW13 317 aa28.41■■■□□ 2.14
RNF38-208ENST00000488058 NBPF11Q86T75 865 aa28.41■■■□□ 2.14
RNF38-208ENST00000488058 SH3TC2Q8TF17 1288 aa28.41■■■□□ 2.14
RNF38-208ENST00000488058 ARMC5Q96C12 935 aa28.41■■■□□ 2.14
RNF38-208ENST00000488058 EVI5LQ96CN4 794 aa28.41■■■□□ 2.14
RNF38-208ENST00000488058 P2RX7Q99572 595 aaKnown RBP28.41■■■□□ 2.14
RNF38-208ENST00000488058 MYCP01106 439 aaPredicted RBP28.4■■■□□ 2.14
RNF38-208ENST00000488058 PRKCZQ05513 592 aa28.4■■■□□ 2.14
RNF38-208ENST00000488058 ZMYM1Q5SVZ6 1142 aa28.4■■■□□ 2.14
RNF38-208ENST00000488058 CHD1LQ86WJ1 897 aa28.4■■■□□ 2.14
RNF38-208ENST00000488058 KIAA1683Q9H0B3 1180 aa28.4■■■□□ 2.14
RNF38-208ENST00000488058 HERVK_113P62684 666 aa28.39■■■□□ 2.14
RNF38-208ENST00000488058 GIMAP6Q6P9H5 292 aa28.39■■■□□ 2.14
RNF38-208ENST00000488058 CLEC10AQ8IUN9 316 aa28.39■■■□□ 2.14
RNF38-208ENST00000488058 C12orf42Q96LP6 360 aa28.39■■■□□ 2.14
RNF38-208ENST00000488058 EPB41L4AQ9HCS5 686 aaPredicted RBP28.39■■■□□ 2.14
RNF38-208ENST00000488058 SBK1Q52WX2 424 aa28.38■■■□□ 2.13
RNF38-208ENST00000488058 CCDC17Q96LX7 622 aa28.38■■■□□ 2.13
RNF38-208ENST00000488058 GABRQQ9UN88 632 aa28.38■■■□□ 2.13
RNF38-208ENST00000488058 TRIM6-TRIM34B2RNG4 842 aa28.37■■■□□ 2.13
RNF38-208ENST00000488058 PATL2C9JE40 543 aaKnown RBP28.37■■■□□ 2.13
RNF38-208ENST00000488058 NUCB1Q02818 461 aa28.37■■■□□ 2.13
RNF38-208ENST00000488058 ZNF333Q96JL9 665 aa28.37■■■□□ 2.13
RNF38-208ENST00000488058 A0A1W2PRG0 241 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L15C9J2P7 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L13C9JLJ4 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L11C9JVI0 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L18D6R9N7 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L22D6RA61 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L17D6RBQ6 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L19D6RCP7 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L20D6RJB6 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 PEX10O60683 326 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 VCAM1P19320 739 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 ICA1Q05084 483 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 USP17L24Q0WX57 530 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 CCDC129Q6ZRS4 1044 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 IFNL3Q8IZI9 196 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 COA7Q96BR5 231 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 PAGR1Q9BTK6 254 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 NACAP1Q9BZK3 213 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 ARHGEF10LQ9HCE6 1279 aa28.36■■■□□ 2.13
RNF38-208ENST00000488058 ATP2B2Q01814 1243 aa28.35■■■□□ 2.13
RNF38-208ENST00000488058 RILPL2Q969X0 211 aa28.35■■■□□ 2.13
RNF38-208ENST00000488058 TMEM106CQ9BVX2 250 aa28.35■■■□□ 2.13
RNF38-208ENST00000488058 MKNK2Q9HBH9 465 aa28.35■■■□□ 2.13
RNF38-208ENST00000488058 POTEFA5A3E0 1075 aa28.34■■■□□ 2.13
RNF38-208ENST00000488058 GRK4P32298 578 aa28.34■■■□□ 2.13
RNF38-208ENST00000488058 NAPBQ9H115 298 aa28.34■■■□□ 2.13
RNF38-208ENST00000488058 RPAP3Q9H6T3 665 aaPredicted RBP28.34■■■□□ 2.13
RNF38-208ENST00000488058 MORF4L1Q9UBU8 362 aa28.34■■■□□ 2.13
RNF38-208ENST00000488058 BIN2Q9UBW5 565 aaPredicted RBP28.34■■■□□ 2.13
RNF38-208ENST00000488058 FLT3LGP49771 235 aa28.33■■■□□ 2.13
RNF38-208ENST00000488058 CATSPERGQ6ZRH7 1159 aa28.33■■■□□ 2.13
RNF38-208ENST00000488058 GPRC5AQ8NFJ5 357 aa28.33■■■□□ 2.13
RNF38-208ENST00000488058 GTF3C2Q8WUA4 911 aaPredicted RBP28.33■■■□□ 2.13
RNF38-208ENST00000488058 TXNRD2Q9NNW7 524 aa28.33■■■□□ 2.13
RNF38-208ENST00000488058 PLEKHM2Q8IWE5 1019 aa28.32■■■□□ 2.12
RNF38-208ENST00000488058 SH2D4AQ9H788 454 aa28.32■■■□□ 2.12
RNF38-208ENST00000488058 RBPJLQ9UBG7 517 aa28.32■■■□□ 2.12
RNF38-208ENST00000488058 ROBO3Q96MS0 1386 aa28.32■■■□□ 2.12
RNF38-208ENST00000488058 RBBP6Q7Z6E9 1792 aaKnown RBP28.32■■■□□ 2.12
RNF38-208ENST00000488058 TANGO6Q9C0B7 1094 aa28.31■■■□□ 2.12
RNF38-208ENST00000488058 DOCK3Q8IZD9 2030 aa28.31■■■□□ 2.12
RNF38-208ENST00000488058 HTTP42858 3142 aa28.3■■■□□ 2.12
RNF38-208ENST00000488058 RASA1P20936 1047 aa28.3■■■□□ 2.12
RNF38-208ENST00000488058 SIAH1Q8IUQ4 282 aa28.3■■■□□ 2.12
RNF38-208ENST00000488058 CCAR1Q8IX12 1150 aaKnown RBP28.3■■■□□ 2.12
RNF38-208ENST00000488058 KANSL2Q9H9L4 492 aa28.3■■■□□ 2.12
RNF38-208ENST00000488058 ADCY3O60266 1144 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 PRDM1O75626 825 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 EEF2P13639 858 aaKnown RBP28.29■■■□□ 2.12
RNF38-208ENST00000488058 ERVK-9P63128 1117 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 ERVK-24P63145 666 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 SPICE1Q8N0Z3 855 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 SLAIN1Q8ND83 568 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 FAM227BQ96M60 508 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 HELLSQ9NRZ9 838 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 TMX2Q9Y320 296 aa28.29■■■□□ 2.12
RNF38-208ENST00000488058 RAD21O60216 631 aa28.28■■■□□ 2.12
RNF38-208ENST00000488058 ELNP15502 786 aa28.28■■■□□ 2.12
RNF38-208ENST00000488058 Q3C1V9 767 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms