RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 LACTBP83111 547 aaPredicted RBP16.92■□□□□ 0.3
PFKFB3-213ENST00000487989 CAP1Q01518 475 aa16.92■□□□□ 0.3
PFKFB3-213ENST00000487989 ZYXQ15942 572 aaKnown RBP16.92■□□□□ 0.3
PFKFB3-213ENST00000487989 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
PFKFB3-213ENST00000487989 FBXO46Q6PJ61 603 aaPredicted RBP16.92■□□□□ 0.3
PFKFB3-213ENST00000487989 ACER1Q8TDN7 264 aa16.92■□□□□ 0.3
PFKFB3-213ENST00000487989 NAPBQ9H115 298 aa16.92■□□□□ 0.3
PFKFB3-213ENST00000487989 EMILIN3Q9NT22 766 aa16.92■□□□□ 0.3
PFKFB3-213ENST00000487989 A0A0D9SFI3 127 aa16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 CCDC85CA6NKD9 419 aa16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 ECM2O94769 699 aaPredicted RBP16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 BCRP11274 1271 aa16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 USP14P54578 494 aa16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 ARHGAP39Q9C0H5 1083 aa16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 KIAA1683Q9H0B3 1180 aa16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 ASCC2Q9H1I8 757 aaPredicted RBP16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
PFKFB3-213ENST00000487989 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
PFKFB3-213ENST00000487989 IRX3P78415 501 aaPredicted RBP16.9■□□□□ 0.3
PFKFB3-213ENST00000487989 VPS53Q5VIR6 699 aa16.9■□□□□ 0.3
PFKFB3-213ENST00000487989 HPS5Q9UPZ3 1129 aa16.9■□□□□ 0.3
PFKFB3-213ENST00000487989 PTPN22Q9Y2R2 807 aa16.9■□□□□ 0.3
PFKFB3-213ENST00000487989 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.3
PFKFB3-213ENST00000487989 LOC285556D6RIA3 1793 aa16.89■□□□□ 0.3
PFKFB3-213ENST00000487989 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
PFKFB3-213ENST00000487989 FOXP2O15409 715 aa16.89■□□□□ 0.29
PFKFB3-213ENST00000487989 PSMC4P43686 418 aa16.89■□□□□ 0.29
PFKFB3-213ENST00000487989 C12orf42Q96LP6 360 aa16.89■□□□□ 0.29
PFKFB3-213ENST00000487989 ZNF287Q9HBT7 754 aa16.89■□□□□ 0.29
PFKFB3-213ENST00000487989 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.29
PFKFB3-213ENST00000487989 FMNL1O95466 1100 aaPredicted RBP16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 RASA1P20936 1047 aa16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 GCLCP48506 637 aaPredicted RBP16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 ICA1Q05084 483 aa16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 PPARAQ07869 468 aa16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 TTC22Q5TAA0 569 aa16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 CLEC10AQ8IUN9 316 aa16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 SIAH1Q8IUQ4 282 aa16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 P2RX7Q99572 595 aaKnown RBP16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 ARHGEF10LQ9HCE6 1279 aa16.88■□□□□ 0.29
PFKFB3-213ENST00000487989 HTTP42858 3142 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 HIP1O00291 1037 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 PRDM1O75626 825 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 GNRH1P01148 92 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 VCAM1P19320 739 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 CTGFP29279 349 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 MFAP1P55081 439 aaKnown RBP16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 ATP2B2Q01814 1243 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 PDE4BQ07343 736 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 ZNF589Q86UQ0 364 aaPredicted RBP16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 ZNF444Q8N0Y2 327 aaPredicted RBP16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 TRIM47Q96LD4 638 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 SH2D4AQ9H788 454 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 KANSL2Q9H9L4 492 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 CCDC171Q6TFL3 1326 aa16.87■□□□□ 0.29
PFKFB3-213ENST00000487989 HSPD1P10809 573 aaKnown RBP16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 EEF2P13639 858 aaKnown RBP16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 GSPT1P15170 499 aaKnown RBP16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 FCGRTP55899 365 aa16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 HERVK_113P62684 666 aa16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 ALX1Q15699 326 aa16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 FAM110CQ1W6H9 321 aa16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 TMX2Q9Y320 296 aa16.86■□□□□ 0.29
PFKFB3-213ENST00000487989 FGAP02671 866 aa16.85■□□□□ 0.29
PFKFB3-213ENST00000487989 HOXD10P28358 340 aa16.85■□□□□ 0.29
PFKFB3-213ENST00000487989 CTDSPL2Q05D32 466 aa16.85■□□□□ 0.29
PFKFB3-213ENST00000487989 CATSPERGQ6ZRH7 1159 aa16.85■□□□□ 0.29
PFKFB3-213ENST00000487989 CENPQQ7L2Z9 268 aaPredicted RBP16.85■□□□□ 0.29
PFKFB3-213ENST00000487989 RPAP3Q9H6T3 665 aaPredicted RBP16.85■□□□□ 0.29
PFKFB3-213ENST00000487989 MYH8P13535 1937 aa16.84■□□□□ 0.29
PFKFB3-213ENST00000487989 PRMT2P55345 433 aa16.84■□□□□ 0.29
PFKFB3-213ENST00000487989 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
PFKFB3-213ENST00000487989 SRRDQ9UH36 339 aa16.84■□□□□ 0.29
PFKFB3-213ENST00000487989 PTCH2Q9Y6C5 1203 aa16.84■□□□□ 0.29
PFKFB3-213ENST00000487989 ZSWIM8A7E2V4 1837 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 NEFLP07196 543 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 TSPY3P0CV98 308 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 TSPY8P0CW00 308 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 KIAA1755Q5JYT7 1200 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 SPICE1Q8N0Z3 855 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 GTF3C2Q8WUA4 911 aaPredicted RBP16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 LPAR1Q92633 364 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 TANGO6Q9C0B7 1094 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 VCPKMTQ9H867 229 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 INCENPQ9NQS7 918 aa16.83■□□□□ 0.28
PFKFB3-213ENST00000487989 RBPJLQ9UBG7 517 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms