RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 F6X3S4 739 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 GLI1P08151 1106 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 YARSP54577 528 aaKnown RBP7.31□□□□□ -1.24
CCDC66-221ENST00000487739 PWP1Q13610 501 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 FYB2Q5VWT5 728 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 RELL1Q8IUW5 271 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 GATAD2BQ8WXI9 593 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 FAM84AQ96KN4 292 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 C19orf73Q9NVV2 129 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC66-221ENST00000487739 CEP131Q9UPN4 1083 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 CORINQ9Y5Q5 1042 aa7.31□□□□□ -1.24
CCDC66-221ENST00000487739 FAM221AA4D161 298 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 PF4P02776 101 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 ZNF124Q15973 351 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 MLANAQ16655 118 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 TMEM67Q5HYA8 995 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 TMEM201Q5SNT2 666 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 RHOVQ96L33 236 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 TMEM74Q96NL1 305 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
CCDC66-221ENST00000487739 SLAMF8Q9P0V8 285 aa7.3□□□□□ -1.24
CCDC66-221ENST00000487739 F13A1P00488 732 aa7.29□□□□□ -1.24
CCDC66-221ENST00000487739 GBP2P32456 591 aaPredicted RBP7.29□□□□□ -1.24
CCDC66-221ENST00000487739 CCDC27Q2M243 656 aa7.29□□□□□ -1.24
CCDC66-221ENST00000487739 MPZL3Q6UWV2 235 aa7.29□□□□□ -1.24
CCDC66-221ENST00000487739 PPP1R13LQ8WUF5 828 aa7.29□□□□□ -1.24
CCDC66-221ENST00000487739 LIN37Q96GY3 246 aaPredicted RBP7.29□□□□□ -1.24
CCDC66-221ENST00000487739 Q96M66 194 aa7.29□□□□□ -1.24
CCDC66-221ENST00000487739 RSRP1Q9BUV0 290 aa7.29□□□□□ -1.24
CCDC66-221ENST00000487739 DBX1A6NMT0 343 aa7.28□□□□□ -1.24
CCDC66-221ENST00000487739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.28□□□□□ -1.24
CCDC66-221ENST00000487739 ESR1P03372 595 aa7.28□□□□□ -1.24
CCDC66-221ENST00000487739 RAC2P15153 192 aa7.28□□□□□ -1.24
CCDC66-221ENST00000487739 MESP2Q0VG99 397 aa7.28□□□□□ -1.24
CCDC66-221ENST00000487739 SNAP47Q5SQN1 464 aa7.28□□□□□ -1.24
CCDC66-221ENST00000487739 SLFN12Q8IYM2 578 aa7.28□□□□□ -1.24
CCDC66-221ENST00000487739 BHLHE22Q8NFJ8 381 aaPredicted RBP7.28□□□□□ -1.24
CCDC66-221ENST00000487739 GPATCH2Q9NW75 528 aa7.28□□□□□ -1.24
CCDC66-221ENST00000487739 KCNH3Q9ULD8 1083 aa7.28□□□□□ -1.24
CCDC66-221ENST00000487739 PRR36Q9H6K5 1346 aa7.27□□□□□ -1.24
CCDC66-221ENST00000487739 UPK3BL1B0FP48 263 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 UPK3BL2E5RIL1 263 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 TAGLNQ01995 201 aaKnown RBP7.27□□□□□ -1.25
CCDC66-221ENST00000487739 TTC6Q86TZ1 520 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 CREG2Q8IUH2 290 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 DTWD2Q8NBA8 298 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 RNF141Q8WVD5 230 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 GPR62Q9BZJ7 368 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 DUSP15Q9H1R2 295 aaPredicted RBP7.27□□□□□ -1.25
CCDC66-221ENST00000487739 REV1Q9UBZ9 1251 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 TMEM59LQ9UK28 342 aa7.27□□□□□ -1.25
CCDC66-221ENST00000487739 ARID1BQ8NFD5 2236 aaPredicted RBP7.27□□□□□ -1.25
CCDC66-221ENST00000487739 RBAK-RBAKDNI3L0D1 243 aa7.26□□□□□ -1.25
CCDC66-221ENST00000487739 TPP2P29144 1249 aaPredicted RBP7.26□□□□□ -1.25
CCDC66-221ENST00000487739 TNNI2P48788 182 aa7.26□□□□□ -1.25
CCDC66-221ENST00000487739 FAM160A1Q05DH4 1040 aa7.26□□□□□ -1.25
CCDC66-221ENST00000487739 MPP2Q14168 576 aa7.26□□□□□ -1.25
CCDC66-221ENST00000487739 KLHL3Q9UH77 587 aa7.26□□□□□ -1.25
CCDC66-221ENST00000487739 DNAJC25-GNG10A0A024R161 153 aa7.25□□□□□ -1.25
CCDC66-221ENST00000487739 HTR3BO95264 441 aa7.25□□□□□ -1.25
CCDC66-221ENST00000487739 GAB4Q2WGN9 574 aa7.25□□□□□ -1.25
CCDC66-221ENST00000487739 GOLM1Q8NBJ4 401 aa7.25□□□□□ -1.25
CCDC66-221ENST00000487739 ABHD4Q8TB40 342 aa7.25□□□□□ -1.25
CCDC66-221ENST00000487739 PPP1R16BQ96T49 567 aa7.25□□□□□ -1.25
CCDC66-221ENST00000487739 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
CCDC66-221ENST00000487739 DUSP13Q9UII6 198 aa7.25□□□□□ -1.25
CCDC66-221ENST00000487739 POLR3KQ9Y2Y1 108 aaPredicted RBP7.25□□□□□ -1.25
CCDC66-221ENST00000487739 WASH4PA8MWX3 477 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 MINDY4BA8MYZ0 360 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 GRIN3BO60391 1043 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 SRFP11831 508 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 HK2P52789 917 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 RALGPS1Q5JS13 557 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 PRR23BQ6ZRT6 265 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 REC114Q7Z4M0 266 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 TSPYL5Q86VY4 417 aaPredicted RBP7.24□□□□□ -1.25
CCDC66-221ENST00000487739 CCDC74BQ96LY2 380 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 ASPNQ9BXN1 380 aa7.24□□□□□ -1.25
CCDC66-221ENST00000487739 EGR3Q06889 387 aa7.23□□□□□ -1.25
CCDC66-221ENST00000487739 PHACTR4Q8IZ21 702 aa7.23□□□□□ -1.25
CCDC66-221ENST00000487739 KREMEN1Q96MU8 473 aa7.23□□□□□ -1.25
CCDC66-221ENST00000487739 KBTBD4Q9NVX7 518 aa7.23□□□□□ -1.25
CCDC66-221ENST00000487739 CHURC1-FNTBB4DL54 471 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 TSPAN15O95858 294 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 HPXP02790 462 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 GARTP22102 1010 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 LTKP29376 864 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 CHMP4BP1P59074 171 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 MLECQ14165 292 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 CWF19L2Q2TBE0 894 aaKnown RBP7.22□□□□□ -1.25
CCDC66-221ENST00000487739 FAM196AQ6ZSG2 479 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 ERMP1Q7Z2K6 904 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 BAHD1Q8TBE0 780 aaPredicted RBP7.22□□□□□ -1.25
CCDC66-221ENST00000487739 MYLIPQ8WY64 445 aa7.22□□□□□ -1.25
CCDC66-221ENST00000487739 LRRN2O75325 713 aa7.21□□□□□ -1.26
CCDC66-221ENST00000487739 RAP1GAPP47736 663 aa7.21□□□□□ -1.26
CCDC66-221ENST00000487739 SYDE1Q6ZW31 735 aaPredicted RBP7.21□□□□□ -1.26
CCDC66-221ENST00000487739 FBXO15Q8NCQ5 510 aaPredicted RBP7.21□□□□□ -1.26
CCDC66-221ENST00000487739 FBXO27Q8NI29 283 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms