RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 SH3D19Q5HYK7 790 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 GPAT2Q6NUI2 795 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 TMEM179Q6ZVK1 233 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 C16orf86Q6ZW13 317 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 SMCR8Q8TEV9 937 aaPredicted RBP14.56□□□□□ -0.08
SFXN3-206ENST00000487721 DYNLL2Q96FJ2 89 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 DIAPH3Q9NSV4 1193 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 FOCADQ5VW36 1801 aa14.55□□□□□ -0.08
SFXN3-206ENST00000487721 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
SFXN3-206ENST00000487721 SDSP20132 328 aa14.55□□□□□ -0.08
SFXN3-206ENST00000487721 LACTBP83111 547 aaPredicted RBP14.55□□□□□ -0.08
SFXN3-206ENST00000487721 PDE4BQ07343 736 aa14.55□□□□□ -0.08
SFXN3-206ENST00000487721 USP17L2Q6R6M4 530 aa14.55□□□□□ -0.08
SFXN3-206ENST00000487721 ARHGAP39Q9C0H5 1083 aa14.55□□□□□ -0.08
SFXN3-206ENST00000487721 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
SFXN3-206ENST00000487721 HTTP42858 3142 aa14.55□□□□□ -0.08
SFXN3-206ENST00000487721 OTOFQ9HC10 1997 aa14.54□□□□□ -0.08
SFXN3-206ENST00000487721 MYCP01106 439 aaPredicted RBP14.54□□□□□ -0.08
SFXN3-206ENST00000487721 GNRH1P01148 92 aa14.54□□□□□ -0.08
SFXN3-206ENST00000487721 JAG1P78504 1218 aa14.54□□□□□ -0.08
SFXN3-206ENST00000487721 NMIQ13287 307 aaPredicted RBP14.54□□□□□ -0.08
SFXN3-206ENST00000487721 HABP4Q5JVS0 413 aaKnown RBP14.54□□□□□ -0.08
SFXN3-206ENST00000487721 ZNF444Q8N0Y2 327 aaPredicted RBP14.54□□□□□ -0.08
SFXN3-206ENST00000487721 SLC44A5Q8NCS7 719 aa14.54□□□□□ -0.08
SFXN3-206ENST00000487721 FAM227BQ96M60 508 aa14.54□□□□□ -0.08
SFXN3-206ENST00000487721 ARHGEF10LQ9HCE6 1279 aa14.54□□□□□ -0.08
SFXN3-206ENST00000487721 LAMB1P07942 1786 aa14.54□□□□□ -0.08
SFXN3-206ENST00000487721 MKI67P46013 3256 aaKnown RBP14.53□□□□□ -0.08
SFXN3-206ENST00000487721 CYP2C8P10632 490 aa14.53□□□□□ -0.08
SFXN3-206ENST00000487721 PDE4AP27815 886 aa14.53□□□□□ -0.08
SFXN3-206ENST00000487721 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
SFXN3-206ENST00000487721 SEPT2Q15019 361 aa14.53□□□□□ -0.08
SFXN3-206ENST00000487721 TTC22Q5TAA0 569 aa14.53□□□□□ -0.08
SFXN3-206ENST00000487721 C17orf99Q6UX52 265 aa14.53□□□□□ -0.08
SFXN3-206ENST00000487721 CCDC129Q6ZRS4 1044 aa14.53□□□□□ -0.08
SFXN3-206ENST00000487721 SH3TC2Q8TF17 1288 aa14.53□□□□□ -0.08
SFXN3-206ENST00000487721 EPB41L4AQ9HCS5 686 aaPredicted RBP14.53□□□□□ -0.08
SFXN3-206ENST00000487721 CPA4Q9UI42 421 aa14.53□□□□□ -0.08
SFXN3-206ENST00000487721 CENPFP49454 3210 aa14.52□□□□□ -0.08
SFXN3-206ENST00000487721 A0A0D9SFI3 127 aa14.52□□□□□ -0.09
SFXN3-206ENST00000487721 ECM2O94769 699 aaPredicted RBP14.52□□□□□ -0.09
SFXN3-206ENST00000487721 PRMT2P55345 433 aa14.52□□□□□ -0.09
SFXN3-206ENST00000487721 EVX2Q03828 476 aa14.52□□□□□ -0.09
SFXN3-206ENST00000487721 ICA1Q05084 483 aa14.52□□□□□ -0.09
SFXN3-206ENST00000487721 SHROOM1Q2M3G4 852 aaPredicted RBP14.52□□□□□ -0.09
SFXN3-206ENST00000487721 TREML2Q5T2D2 321 aa14.52□□□□□ -0.09
SFXN3-206ENST00000487721 CWC27Q6UX04 472 aaKnown RBP14.52□□□□□ -0.09
SFXN3-206ENST00000487721 STK11IPQ8N1F8 1099 aa14.52□□□□□ -0.09
SFXN3-206ENST00000487721 KIAA1683Q9H0B3 1180 aa14.52□□□□□ -0.09
SFXN3-206ENST00000487721 KANSL2Q9H9L4 492 aa14.52□□□□□ -0.09
SFXN3-206ENST00000487721 CCDC171Q6TFL3 1326 aa14.51□□□□□ -0.09
SFXN3-206ENST00000487721 AKR1B1P15121 316 aa14.51□□□□□ -0.09
SFXN3-206ENST00000487721 HOXA7P31268 230 aaPredicted RBP14.51□□□□□ -0.09
SFXN3-206ENST00000487721 PSMC4P43686 418 aa14.51□□□□□ -0.09
SFXN3-206ENST00000487721 GCLCP48506 637 aaPredicted RBP14.51□□□□□ -0.09
SFXN3-206ENST00000487721 ATP2B2Q01814 1243 aa14.51□□□□□ -0.09
SFXN3-206ENST00000487721 PPARAQ07869 468 aa14.51□□□□□ -0.09
SFXN3-206ENST00000487721 ALX1Q15699 326 aa14.51□□□□□ -0.09
SFXN3-206ENST00000487721 ZYXQ15942 572 aaKnown RBP14.51□□□□□ -0.09
SFXN3-206ENST00000487721 GTF3C2Q8WUA4 911 aaPredicted RBP14.51□□□□□ -0.09
SFXN3-206ENST00000487721 RUFY2Q8WXA3 655 aa14.51□□□□□ -0.09
SFXN3-206ENST00000487721 C12orf42Q96LP6 360 aa14.51□□□□□ -0.09
SFXN3-206ENST00000487721 ROBO3Q96MS0 1386 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L15C9J2P7 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L13C9JLJ4 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L11C9JVI0 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L18D6R9N7 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L22D6RA61 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L17D6RBQ6 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L19D6RCP7 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L20D6RJB6 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 HOXD10P28358 340 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 CTGFP29279 349 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 USP17L24Q0WX57 530 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 PPP4R3BQ5MIZ7 849 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 ACER1Q8TDN7 264 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 ASCC2Q9H1I8 757 aaPredicted RBP14.5□□□□□ -0.09
SFXN3-206ENST00000487721 EMILIN3Q9NT22 766 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 GTF3C3Q9Y5Q9 886 aa14.5□□□□□ -0.09
SFXN3-206ENST00000487721 KIAA0100Q14667 2235 aaKnown RBP14.49□□□□□ -0.09
SFXN3-206ENST00000487721 MYH1P12882 1939 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 FMNL1O95466 1100 aaPredicted RBP14.49□□□□□ -0.09
SFXN3-206ENST00000487721 TSPY3P0CV98 308 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 TSPY8P0CW00 308 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 HSPD1P10809 573 aaKnown RBP14.49□□□□□ -0.09
SFXN3-206ENST00000487721 RASA1P20936 1047 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 GUCY1A2P33402 732 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 VPS53Q5VIR6 699 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 LPAR1Q92633 364 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 TRIM47Q96LD4 638 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 SRRDQ9UH36 339 aa14.49□□□□□ -0.09
SFXN3-206ENST00000487721 DOCK1Q14185 1865 aa14.48□□□□□ -0.09
SFXN3-206ENST00000487721 NAV1Q8NEY1 1877 aa14.48□□□□□ -0.09
SFXN3-206ENST00000487721 ZMYM6O95789 1325 aa14.48□□□□□ -0.09
SFXN3-206ENST00000487721 SMIM22K7EJ46 135 aa14.48□□□□□ -0.09
SFXN3-206ENST00000487721 PRDM1O75626 825 aa14.48□□□□□ -0.09
SFXN3-206ENST00000487721 FGAP02671 866 aa14.48□□□□□ -0.09
SFXN3-206ENST00000487721 BCRP11274 1271 aa14.48□□□□□ -0.09
SFXN3-206ENST00000487721 GSPT1P15170 499 aaKnown RBP14.48□□□□□ -0.09
SFXN3-206ENST00000487721 FCGRTP55899 365 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms