RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 MYPNQ86TC9 1320 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 GSG1L2A8MUP6 293 aa24.51■■□□□ 1.51
HDAC4-209ENST00000487617 M0R2C6 588 aa24.51■■□□□ 1.51
HDAC4-209ENST00000487617 IGHDP01880 384 aa24.51■■□□□ 1.51
HDAC4-209ENST00000487617 CDK8P49336 464 aa24.51■■□□□ 1.51
HDAC4-209ENST00000487617 USP14P54578 494 aa24.51■■□□□ 1.51
HDAC4-209ENST00000487617 ARPP21Q9UBL0 812 aaPredicted RBP24.51■■□□□ 1.51
HDAC4-209ENST00000487617 GNAT2P19087 354 aa24.5■■□□□ 1.51
HDAC4-209ENST00000487617 GIMAP6Q6P9H5 292 aa24.5■■□□□ 1.51
HDAC4-209ENST00000487617 TMEM179Q6ZVK1 233 aa24.5■■□□□ 1.51
HDAC4-209ENST00000487617 C16orf86Q6ZW13 317 aa24.5■■□□□ 1.51
HDAC4-209ENST00000487617 RAET1EQ8TD07 263 aa24.5■■□□□ 1.51
HDAC4-209ENST00000487617 SH3TC2Q8TF17 1288 aa24.5■■□□□ 1.51
HDAC4-209ENST00000487617 C12orf42Q96LP6 360 aa24.5■■□□□ 1.51
HDAC4-209ENST00000487617 P2RX7Q99572 595 aaKnown RBP24.5■■□□□ 1.51
HDAC4-209ENST00000487617 TNPO2O14787 897 aaKnown RBP24.49■■□□□ 1.51
HDAC4-209ENST00000487617 PRKCZQ05513 592 aa24.49■■□□□ 1.51
HDAC4-209ENST00000487617 ZNF333Q96JL9 665 aa24.49■■□□□ 1.51
HDAC4-209ENST00000487617 CCDC17Q96LX7 622 aa24.49■■□□□ 1.51
HDAC4-209ENST00000487617 APPP05067 770 aa24.48■■□□□ 1.51
HDAC4-209ENST00000487617 AKR1B1P15121 316 aa24.48■■□□□ 1.51
HDAC4-209ENST00000487617 HERVK_113P62684 666 aa24.48■■□□□ 1.51
HDAC4-209ENST00000487617 SBK1Q52WX2 424 aa24.48■■□□□ 1.51
HDAC4-209ENST00000487617 SEC62Q99442 399 aaKnown RBP24.48■■□□□ 1.51
HDAC4-209ENST00000487617 BAZ2AQ9UIF9 1905 aaKnown RBP24.47■■□□□ 1.51
HDAC4-209ENST00000487617 MINDY4BA8MYZ0 360 aa24.47■■□□□ 1.51
HDAC4-209ENST00000487617 TDO2P48775 406 aa24.47■■□□□ 1.51
HDAC4-209ENST00000487617 ZMYM1Q5SVZ6 1142 aa24.47■■□□□ 1.51
HDAC4-209ENST00000487617 EVI5LQ96CN4 794 aa24.47■■□□□ 1.51
HDAC4-209ENST00000487617 GABRQQ9UN88 632 aa24.47■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L15C9J2P7 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L13C9JLJ4 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L11C9JVI0 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L18D6R9N7 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L22D6RA61 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L17D6RBQ6 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L19D6RCP7 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L20D6RJB6 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 MYCP01106 439 aaPredicted RBP24.46■■□□□ 1.51
HDAC4-209ENST00000487617 VCAM1P19320 739 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 USP17L24Q0WX57 530 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 CHD1LQ86WJ1 897 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 COA7Q96BR5 231 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 TMEM106CQ9BVX2 250 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 EPB41L4AQ9HCS5 686 aaPredicted RBP24.46■■□□□ 1.51
HDAC4-209ENST00000487617 MORF4L1Q9UBU8 362 aa24.46■■□□□ 1.51
HDAC4-209ENST00000487617 A0A1W2PRG0 241 aa24.45■■□□□ 1.5
HDAC4-209ENST00000487617 POTEFA5A3E0 1075 aa24.45■■□□□ 1.5
HDAC4-209ENST00000487617 PATL2C9JE40 543 aaKnown RBP24.45■■□□□ 1.5
HDAC4-209ENST00000487617 GRK4P32298 578 aa24.45■■□□□ 1.5
HDAC4-209ENST00000487617 IRX6P78412 446 aaPredicted RBP24.45■■□□□ 1.5
HDAC4-209ENST00000487617 NUCB1Q02818 461 aa24.45■■□□□ 1.5
HDAC4-209ENST00000487617 STK11IPQ8N1F8 1099 aa24.45■■□□□ 1.5
HDAC4-209ENST00000487617 HTTP42858 3142 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 FLT3LGP49771 235 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 ICA1Q05084 483 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 CATSPERGQ6ZRH7 1159 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 CLEC10AQ8IUN9 316 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 GPRC5AQ8NFJ5 357 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 GTF3C2Q8WUA4 911 aaPredicted RBP24.44■■□□□ 1.5
HDAC4-209ENST00000487617 NACAP1Q9BZK3 213 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 ARHGEF10LQ9HCE6 1279 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 TXNRD2Q9NNW7 524 aa24.44■■□□□ 1.5
HDAC4-209ENST00000487617 PEX10O60683 326 aa24.43■■□□□ 1.5
HDAC4-209ENST00000487617 IFNL3Q8IZI9 196 aa24.43■■□□□ 1.5
HDAC4-209ENST00000487617 PAGR1Q9BTK6 254 aa24.43■■□□□ 1.5
HDAC4-209ENST00000487617 RPAP3Q9H6T3 665 aaPredicted RBP24.43■■□□□ 1.5
HDAC4-209ENST00000487617 RBPJLQ9UBG7 517 aa24.43■■□□□ 1.5
HDAC4-209ENST00000487617 BIN2Q9UBW5 565 aaPredicted RBP24.43■■□□□ 1.5
HDAC4-209ENST00000487617 SIAH1Q8IUQ4 282 aa24.42■■□□□ 1.5
HDAC4-209ENST00000487617 SH2D4AQ9H788 454 aa24.42■■□□□ 1.5
HDAC4-209ENST00000487617 MKNK2Q9HBH9 465 aa24.42■■□□□ 1.5
HDAC4-209ENST00000487617 TRIM6-TRIM34B2RNG4 842 aa24.41■■□□□ 1.5
HDAC4-209ENST00000487617 ADCY3O60266 1144 aa24.41■■□□□ 1.5
HDAC4-209ENST00000487617 CCDC129Q6ZRS4 1044 aa24.41■■□□□ 1.5
HDAC4-209ENST00000487617 SLAIN1Q8ND83 568 aa24.41■■□□□ 1.5
HDAC4-209ENST00000487617 ROBO3Q96MS0 1386 aa24.41■■□□□ 1.5
HDAC4-209ENST00000487617 RASA1P20936 1047 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 ERVK-9P63128 1117 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 ERVK-24P63145 666 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 ATP2B2Q01814 1243 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 IRF5Q13568 498 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 PLEKHM2Q8IWE5 1019 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 NAPBQ9H115 298 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 KANSL2Q9H9L4 492 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 TMX2Q9Y320 296 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 MGAMO43451 1857 aa24.4■■□□□ 1.5
HDAC4-209ENST00000487617 EEF2P13639 858 aaKnown RBP24.39■■□□□ 1.49
HDAC4-209ENST00000487617 EN2P19622 333 aaPredicted RBP24.39■■□□□ 1.49
HDAC4-209ENST00000487617 Q3C1V9 767 aa24.39■■□□□ 1.49
HDAC4-209ENST00000487617 POTEEQ6S8J3 1075 aa24.39■■□□□ 1.49
HDAC4-209ENST00000487617 CCAR1Q8IX12 1150 aaKnown RBP24.39■■□□□ 1.49
HDAC4-209ENST00000487617 RILPL2Q969X0 211 aa24.39■■□□□ 1.49
HDAC4-209ENST00000487617 ZNF287Q9HBT7 754 aa24.39■■□□□ 1.49
HDAC4-209ENST00000487617 RABGAP1Q9Y3P9 1069 aa24.39■■□□□ 1.49
HDAC4-209ENST00000487617 ELNP15502 786 aa24.38■■□□□ 1.49
HDAC4-209ENST00000487617 UBXN2AP68543 259 aa24.38■■□□□ 1.49
HDAC4-209ENST00000487617 MTFR1Q15390 333 aa24.38■■□□□ 1.49
HDAC4-209ENST00000487617 KIAA1755Q5JYT7 1200 aa24.38■■□□□ 1.49
HDAC4-209ENST00000487617 LPAR1Q92633 364 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms