RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PHIPQ8WWQ0 1821 aa21.19■□□□□ 0.98
COL6A1-204ENST00000486023 HTTP42858 3142 aa21.18■□□□□ 0.98
COL6A1-204ENST00000486023 ZSWIM8A7E2V4 1837 aa21.18■□□□□ 0.98
COL6A1-204ENST00000486023 GPAA1O43292 621 aa21.18■□□□□ 0.98
COL6A1-204ENST00000486023 GUCY1A2P33402 732 aa21.18■□□□□ 0.98
COL6A1-204ENST00000486023 CDK8P49336 464 aa21.18■□□□□ 0.98
COL6A1-204ENST00000486023 ZNF333Q96JL9 665 aa21.18■□□□□ 0.98
COL6A1-204ENST00000486023 PAGR1Q9BTK6 254 aa21.18■□□□□ 0.98
COL6A1-204ENST00000486023 ATAD5Q96QE3 1844 aa21.18■□□□□ 0.98
COL6A1-204ENST00000486023 IGHDP01880 384 aa21.17■□□□□ 0.98
COL6A1-204ENST00000486023 AKR1B1P15121 316 aa21.17■□□□□ 0.98
COL6A1-204ENST00000486023 USP14P54578 494 aa21.17■□□□□ 0.98
COL6A1-204ENST00000486023 ATP2B2Q01814 1243 aa21.17■□□□□ 0.98
COL6A1-204ENST00000486023 FAM110CQ1W6H9 321 aa21.17■□□□□ 0.98
COL6A1-204ENST00000486023 COA7Q96BR5 231 aa21.17■□□□□ 0.98
COL6A1-204ENST00000486023 GSG1L2A8MUP6 293 aa21.16■□□□□ 0.98
COL6A1-204ENST00000486023 EN2P19622 333 aaPredicted RBP21.16■□□□□ 0.98
COL6A1-204ENST00000486023 HOXA7P31268 230 aaPredicted RBP21.16■□□□□ 0.98
COL6A1-204ENST00000486023 GRK4P32298 578 aa21.16■□□□□ 0.98
COL6A1-204ENST00000486023 TDO2P48775 406 aa21.16■□□□□ 0.98
COL6A1-204ENST00000486023 FLT3LGP49771 235 aa21.16■□□□□ 0.98
COL6A1-204ENST00000486023 HERVK_113P62684 666 aa21.16■□□□□ 0.98
COL6A1-204ENST00000486023 AAMPQ13685 434 aa21.16■□□□□ 0.98
COL6A1-204ENST00000486023 CLEC10AQ8IUN9 316 aa21.16■□□□□ 0.98
COL6A1-204ENST00000486023 CCAR1Q8IX12 1150 aaKnown RBP21.16■□□□□ 0.98
COL6A1-204ENST00000486023 CENPFP49454 3210 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L15C9J2P7 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L13C9JLJ4 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L11C9JVI0 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L18D6R9N7 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L22D6RA61 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L17D6RBQ6 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L19D6RCP7 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L20D6RJB6 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 USP17L24Q0WX57 530 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 TMEM179Q6ZVK1 233 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 KIAA1683Q9H0B3 1180 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 NAV1Q8NEY1 1877 aa21.15■□□□□ 0.98
COL6A1-204ENST00000486023 A0A1W2PRG0 241 aa21.14■□□□□ 0.97
COL6A1-204ENST00000486023 ELNP15502 786 aa21.14■□□□□ 0.97
COL6A1-204ENST00000486023 PDE1AP54750 535 aa21.14■□□□□ 0.97
COL6A1-204ENST00000486023 MTFR1Q15390 333 aa21.14■□□□□ 0.97
COL6A1-204ENST00000486023 SAMD1Q6SPF0 538 aaPredicted RBP21.14■□□□□ 0.97
COL6A1-204ENST00000486023 GPRC5AQ8NFJ5 357 aa21.14■□□□□ 0.97
COL6A1-204ENST00000486023 RPAP3Q9H6T3 665 aaPredicted RBP21.14■□□□□ 0.97
COL6A1-204ENST00000486023 MKNK2Q9HBH9 465 aa21.14■□□□□ 0.97
COL6A1-204ENST00000486023 ARPP21Q9UBL0 812 aaPredicted RBP21.14■□□□□ 0.97
COL6A1-204ENST00000486023 PATL2C9JE40 543 aaKnown RBP21.13■□□□□ 0.97
COL6A1-204ENST00000486023 RAD21O60216 631 aa21.13■□□□□ 0.97
COL6A1-204ENST00000486023 ADCY3O60266 1144 aa21.13■□□□□ 0.97
COL6A1-204ENST00000486023 GNAT2P19087 354 aa21.13■□□□□ 0.97
COL6A1-204ENST00000486023 VCAM1P19320 739 aa21.13■□□□□ 0.97
COL6A1-204ENST00000486023 C16orf86Q6ZW13 317 aa21.13■□□□□ 0.97
COL6A1-204ENST00000486023 CWC22Q9HCG8 908 aaKnown RBP21.13■□□□□ 0.97
COL6A1-204ENST00000486023 TXNRD2Q9NNW7 524 aa21.13■□□□□ 0.97
COL6A1-204ENST00000486023 RBPJLQ9UBG7 517 aa21.13■□□□□ 0.97
COL6A1-204ENST00000486023 PTPRFP10586 1907 aa21.13■□□□□ 0.97
COL6A1-204ENST00000486023 SALL3Q9BXA9 1300 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 TRIM6-TRIM34B2RNG4 842 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 ICA1Q05084 483 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 Q3C1V9 767 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 CATSPERGQ6ZRH7 1159 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 CCDC129Q6ZRS4 1044 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 SPICE1Q8N0Z3 855 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 C12orf42Q96LP6 360 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 CCDC17Q96LX7 622 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 ARHGEF10LQ9HCE6 1279 aa21.12■□□□□ 0.97
COL6A1-204ENST00000486023 WDR78Q5VTH9 848 aa21.11■□□□□ 0.97
COL6A1-204ENST00000486023 IFNL3Q8IZI9 196 aa21.11■□□□□ 0.97
COL6A1-204ENST00000486023 RILPL2Q969X0 211 aa21.11■□□□□ 0.97
COL6A1-204ENST00000486023 EVI5LQ96CN4 794 aa21.11■□□□□ 0.97
COL6A1-204ENST00000486023 NACAP1Q9BZK3 213 aa21.11■□□□□ 0.97
COL6A1-204ENST00000486023 TANGO6Q9C0B7 1094 aa21.11■□□□□ 0.97
COL6A1-204ENST00000486023 EPB41L4AQ9HCS5 686 aaPredicted RBP21.11■□□□□ 0.97
COL6A1-204ENST00000486023 STAP2Q9UGK3 403 aa21.11■□□□□ 0.97
COL6A1-204ENST00000486023 PRDM1O75626 825 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 UBXN2AP68543 259 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 SBK1Q52WX2 424 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 ZMYM1Q5SVZ6 1142 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 GIMAP6Q6P9H5 292 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 CHD1LQ86WJ1 897 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 SMC5Q8IY18 1101 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 SLAIN1Q8ND83 568 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 MORF4L1Q9UBU8 362 aa21.1■□□□□ 0.97
COL6A1-204ENST00000486023 CCL5P13501 91 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 EEF2P13639 858 aaKnown RBP21.09■□□□□ 0.97
COL6A1-204ENST00000486023 CYP2B6P20813 491 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 ERVK-9P63128 1117 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 ERVK-24P63145 666 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 KIAA1755Q5JYT7 1200 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 SIAH1Q8IUQ4 282 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 RNF208Q9H0X6 261 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 NAPBQ9H115 298 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 LOC285556D6RIA3 1793 aa21.09■□□□□ 0.97
COL6A1-204ENST00000486023 DDX60LQ5H9U9 1706 aaKnown RBP21.09■□□□□ 0.97
COL6A1-204ENST00000486023 ZNF444Q8N0Y2 327 aaPredicted RBP21.08■□□□□ 0.97
COL6A1-204ENST00000486023 PORCNQ9H237 461 aa21.08■□□□□ 0.97
COL6A1-204ENST00000486023 SH2D4AQ9H788 454 aa21.08■□□□□ 0.97
COL6A1-204ENST00000486023 BAZ2AQ9UIF9 1905 aaKnown RBP21.08■□□□□ 0.96
COL6A1-204ENST00000486023 INHAP05111 366 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms