RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PDE6AP16499 860 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 CTGFP29279 349 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 TNNI2P48788 182 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 ZNF157P51786 506 aaPredicted RBP6.97□□□□□ -1.29
CUX1-208ENST00000485792 GSTO1P78417 241 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 KIF23Q02241 960 aaPredicted RBP6.97□□□□□ -1.29
CUX1-208ENST00000485792 PDE4DQ08499 809 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 OS9Q13438 667 aaPredicted RBP6.97□□□□□ -1.29
CUX1-208ENST00000485792 SLC4A8Q2Y0W8 1093 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 TTC39AQ5SRH9 613 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 NOL9Q5SY16 702 aaKnown RBP6.97□□□□□ -1.29
CUX1-208ENST00000485792 GORABQ5T7V8 394 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 SPRYD7Q5W111 196 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 MIGA2Q7L4E1 593 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 ARMC9Q7Z3E5 817 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 ANKRD13AQ8IZ07 590 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 MIGA1Q8NAN2 632 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 ZKSCAN4Q969J2 545 aaPredicted RBP6.97□□□□□ -1.29
CUX1-208ENST00000485792 WNK4Q96J92 1243 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 PRDM10Q9NQV6 1147 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 USP40Q9NVE5 1235 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 SAGE1Q9NXZ1 904 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 AATFQ9NY61 560 aaKnown RBP eCLIP6.97□□□□□ -1.29
CUX1-208ENST00000485792 HCSTQ9UBK5 93 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 STAP2Q9UGK3 403 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 ANGEL1Q9UNK9 670 aaKnown RBP6.97□□□□□ -1.29
CUX1-208ENST00000485792 FRMPD3Q5JV73 1810 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 CYP2D7A0A087X1C5 515 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 M0R2C6 588 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 SMAPO00193 183 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 GOLIM4O00461 696 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 CA12O43570 354 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 GUCY1A2P33402 732 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 NF2P35240 595 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 ADD2P35612 726 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
CUX1-208ENST00000485792 INHBEP58166 350 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 PICALMQ13492 652 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 COL9A3Q14050 684 aaPredicted RBP6.96□□□□□ -1.3
CUX1-208ENST00000485792 TTF1Q15361 905 aaPredicted RBP6.96□□□□□ -1.3
CUX1-208ENST00000485792 LAPTM4BQ86VI4 370 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 TICAM2Q86XR7 235 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 DZIP1Q86YF9 867 aaKnown RBP6.96□□□□□ -1.3
CUX1-208ENST00000485792 CERS3Q8IU89 383 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 CLEC10AQ8IUN9 316 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 SLC44A5Q8NCS7 719 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 BRI3BPQ8WY22 251 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 WNT2BQ93097 391 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 GCC1Q96CN9 775 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 HOOK2Q96ED9 719 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 SEC62Q99442 399 aaKnown RBP6.96□□□□□ -1.3
CUX1-208ENST00000485792 PUS7LQ9H0K6 701 aaKnown RBP6.96□□□□□ -1.3
CUX1-208ENST00000485792 OSBPL5Q9H0X9 879 aaPredicted RBP6.96□□□□□ -1.3
CUX1-208ENST00000485792 BOLA2Q9H3K6 86 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 ELP3Q9H9T3 547 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 SEPT9Q9UHD8 586 aaPredicted RBP6.96□□□□□ -1.3
CUX1-208ENST00000485792 TTC41PQ6P2S7 1318 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 ZNF532Q9HCE3 1301 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 LRRC37A2A6NM11 1700 aa6.96□□□□□ -1.3
CUX1-208ENST00000485792 MYH6P13533 1939 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 RCCD1A6NED2 376 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 SPDYE5A6NIY4 337 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 PEX10O60683 326 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 IFIT2P09913 472 aaKnown RBP6.95□□□□□ -1.3
CUX1-208ENST00000485792 GSPT1P15170 499 aaKnown RBP6.95□□□□□ -1.3
CUX1-208ENST00000485792 GABPAQ06546 454 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 NAA16Q6N069 864 aaPredicted RBP6.95□□□□□ -1.3
CUX1-208ENST00000485792 MAPKAPK5Q8IW41 473 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 PARP9Q8IXQ6 854 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 FAM43AQ8N2R8 423 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 MAGEB6Q8N7X4 407 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 ANKK1Q8NFD2 765 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 SDR42E1Q8WUS8 393 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 OSBP2Q969R2 916 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 DNAJC2Q99543 621 aaKnown RBP6.95□□□□□ -1.3
CUX1-208ENST00000485792 OSBPL3Q9H4L5 887 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 ECHDC1Q9NTX5 307 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 RNF186Q9NXI6 227 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 TMOD2Q9NZR1 351 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 LRP2BPQ9P2M1 347 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 KCNH4Q9UQ05 1017 aa6.95□□□□□ -1.3
CUX1-208ENST00000485792 PLXNA1Q9UIW2 1896 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 IDH1O75874 414 aaKnown RBP6.94□□□□□ -1.3
CUX1-208ENST00000485792 CYP7A1P22680 504 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 DNAJB2P25686 324 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 CTCFP49711 727 aaPredicted RBP6.94□□□□□ -1.3
CUX1-208ENST00000485792 PLCD1P51178 756 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 LBX1P52954 281 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 MDM2Q00987 491 aaPredicted RBP6.94□□□□□ -1.3
CUX1-208ENST00000485792 PPATQ06203 517 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 MAP3K12Q12852 859 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 TTLL12Q14166 644 aaPredicted RBP6.94□□□□□ -1.3
CUX1-208ENST00000485792 UBE3CQ15386 1083 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 KIAA1755Q5JYT7 1200 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 DCAF15Q66K64 600 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 CCDC129Q6ZRS4 1044 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 RASGRP2Q7LDG7 609 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 ERO1BQ86YB8 467 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 NLRP7Q8WX94 980 aa6.94□□□□□ -1.3
CUX1-208ENST00000485792 OPTNQ96CV9 577 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms