RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 GBP1P32455 592 aa7.28□□□□□ -1.24
SMC4-215ENST00000484799 TAGLNQ01995 201 aaKnown RBP7.28□□□□□ -1.24
SMC4-215ENST00000484799 TMEM67Q5HYA8 995 aa7.28□□□□□ -1.24
SMC4-215ENST00000484799 ZSWIM9Q86XI8 627 aa7.28□□□□□ -1.24
SMC4-215ENST00000484799 CREG2Q8IUH2 290 aa7.28□□□□□ -1.24
SMC4-215ENST00000484799 ACSF2Q96CM8 615 aaPredicted RBP7.28□□□□□ -1.24
SMC4-215ENST00000484799 ASCC2Q9H1I8 757 aaPredicted RBP7.28□□□□□ -1.24
SMC4-215ENST00000484799 SEMA3GQ9NS98 782 aa7.28□□□□□ -1.24
SMC4-215ENST00000484799 CORINQ9Y5Q5 1042 aa7.28□□□□□ -1.24
SMC4-215ENST00000484799 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.24
SMC4-215ENST00000484799 LRRC10BA6NIK2 292 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 UPK3BL1B0FP48 263 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 UPK3BL2E5RIL1 263 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 TNK2Q07912 1038 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 CWF19L2Q2TBE0 894 aaKnown RBP7.27□□□□□ -1.25
SMC4-215ENST00000484799 TMPRSS7Q7RTY8 843 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 POU5F2Q8N7G0 328 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 FLAD1Q8NFF5 587 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 GIPC2Q8TF65 315 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 CYB5D2Q8WUJ1 264 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 KIRREL1Q96J84 757 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 SLAMF8Q9P0V8 285 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 ST14Q9Y5Y6 855 aa7.27□□□□□ -1.25
SMC4-215ENST00000484799 GRIN3BO60391 1043 aa7.26□□□□□ -1.25
SMC4-215ENST00000484799 MPP2Q14168 576 aa7.26□□□□□ -1.25
SMC4-215ENST00000484799 CLEC16AQ2KHT3 1053 aa7.26□□□□□ -1.25
SMC4-215ENST00000484799 CCDC74BQ96LY2 380 aa7.26□□□□□ -1.25
SMC4-215ENST00000484799 GGT7Q9UJ14 662 aa7.26□□□□□ -1.25
SMC4-215ENST00000484799 CTNND2Q9UQB3 1225 aa7.26□□□□□ -1.25
SMC4-215ENST00000484799 BTBD11A6QL63 1104 aa7.25□□□□□ -1.25
SMC4-215ENST00000484799 TPP2P29144 1249 aaPredicted RBP7.25□□□□□ -1.25
SMC4-215ENST00000484799 GDNFP39905 211 aa7.25□□□□□ -1.25
SMC4-215ENST00000484799 MLANAQ16655 118 aa7.25□□□□□ -1.25
SMC4-215ENST00000484799 TMEM201Q5SNT2 666 aa7.25□□□□□ -1.25
SMC4-215ENST00000484799 HS2ST1Q7LGA3 356 aa7.25□□□□□ -1.25
SMC4-215ENST00000484799 TTC6Q86TZ1 520 aa7.25□□□□□ -1.25
SMC4-215ENST00000484799 ALPK1Q96QP1 1244 aa7.25□□□□□ -1.25
SMC4-215ENST00000484799 REV1Q9UBZ9 1251 aa7.25□□□□□ -1.25
SMC4-215ENST00000484799 ROBO2Q9HCK4 1378 aa7.24□□□□□ -1.25
SMC4-215ENST00000484799 FAM221AA4D161 298 aa7.24□□□□□ -1.25
SMC4-215ENST00000484799 TLR3O15455 904 aaKnown RBP7.24□□□□□ -1.25
SMC4-215ENST00000484799 MCM4P33991 863 aa7.24□□□□□ -1.25
SMC4-215ENST00000484799 ZNF648Q5T619 568 aaPredicted RBP7.24□□□□□ -1.25
SMC4-215ENST00000484799 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
SMC4-215ENST00000484799 TMCO4Q5TGY1 634 aa7.24□□□□□ -1.25
SMC4-215ENST00000484799 KBTBD4Q9NVX7 518 aa7.24□□□□□ -1.25
SMC4-215ENST00000484799 DUSP13Q9UII6 198 aa7.24□□□□□ -1.25
SMC4-215ENST00000484799 SUPT16HQ9Y5B9 1047 aaKnown RBP7.24□□□□□ -1.25
SMC4-215ENST00000484799 CARMIL2Q6F5E8 1435 aa7.24□□□□□ -1.25
SMC4-215ENST00000484799 HTR3BO95264 441 aa7.23□□□□□ -1.25
SMC4-215ENST00000484799 C8AP07357 584 aa7.23□□□□□ -1.25
SMC4-215ENST00000484799 GLI1P08151 1106 aa7.23□□□□□ -1.25
SMC4-215ENST00000484799 LTKP29376 864 aa7.23□□□□□ -1.25
SMC4-215ENST00000484799 EIF4A3P38919 411 aaKnown RBP7.23□□□□□ -1.25
SMC4-215ENST00000484799 SSU72P8A0A1W2PR75 194 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 CHURC1-FNTBB4DL54 471 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 RAG1P15918 1043 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 HK2P52789 917 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 FAM196AQ6ZSG2 479 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 SLFN12Q8IYM2 578 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 TMEM87AQ8NBN3 555 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 DNAJB8Q8NHS0 232 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 ABHD4Q8TB40 342 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 RNF141Q8WVD5 230 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 DHX38Q92620 1227 aaKnown RBP7.22□□□□□ -1.25
SMC4-215ENST00000484799 FAM84AQ96KN4 292 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 RHOVQ96L33 236 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 KRTAP4-12Q9BQ66 201 aa7.22□□□□□ -1.25
SMC4-215ENST00000484799 FZD5Q13467 585 aa7.21□□□□□ -1.26
SMC4-215ENST00000484799 REC114Q7Z4M0 266 aa7.21□□□□□ -1.26
SMC4-215ENST00000484799 BAHD1Q8TBE0 780 aaPredicted RBP7.21□□□□□ -1.26
SMC4-215ENST00000484799 ZNF296Q8WUU4 475 aaPredicted RBP7.21□□□□□ -1.26
SMC4-215ENST00000484799 MYLIPQ8WY64 445 aa7.21□□□□□ -1.26
SMC4-215ENST00000484799 KIF2CQ99661 725 aa7.21□□□□□ -1.26
SMC4-215ENST00000484799 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.21□□□□□ -1.26
SMC4-215ENST00000484799 EGR3Q06889 387 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 FBXL19Q6PCT2 694 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 OXR1Q8N573 874 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 FBXO27Q8NI29 283 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 LIN37Q96GY3 246 aaPredicted RBP7.2□□□□□ -1.26
SMC4-215ENST00000484799 KREMEN1Q96MU8 473 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 ASPNQ9BXN1 380 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 GPR62Q9BZJ7 368 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 COPRSQ9NQ92 184 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 TMEM59LQ9UK28 342 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 PCDHB14Q9Y5E9 798 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 PRR36Q9H6K5 1346 aa7.2□□□□□ -1.26
SMC4-215ENST00000484799 RNF4P78317 190 aa7.19□□□□□ -1.26
SMC4-215ENST00000484799 FYB2Q5VWT5 728 aa7.19□□□□□ -1.26
SMC4-215ENST00000484799 TSPYL5Q86VY4 417 aaPredicted RBP7.19□□□□□ -1.26
SMC4-215ENST00000484799 KRTAP1-3Q8IUG1 177 aa7.19□□□□□ -1.26
SMC4-215ENST00000484799 DTWD2Q8NBA8 298 aa7.19□□□□□ -1.26
SMC4-215ENST00000484799 Q96M66 194 aa7.19□□□□□ -1.26
SMC4-215ENST00000484799 DUSP15Q9H1R2 295 aaPredicted RBP7.19□□□□□ -1.26
SMC4-215ENST00000484799 BRMS1Q9HCU9 246 aa7.19□□□□□ -1.26
SMC4-215ENST00000484799 POLR3KQ9Y2Y1 108 aaPredicted RBP7.19□□□□□ -1.26
SMC4-215ENST00000484799 LRRN2O75325 713 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 ZNF165P49910 485 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 APOBRQ0VD83 1088 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 ZNF124Q15973 351 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms