RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 NBPF9Q3BBW0 867 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 OLFM4Q6UX06 510 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 NOA1Q8NC60 698 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 TATDN2Q93075 761 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 GDAP1L1Q96MZ0 367 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 FANCLQ9NW38 375 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 HPCAL4Q9UM19 191 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 ANGEL1Q9UNK9 670 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 ANKRD33BA6NCL7 494 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 ZNF213O14771 459 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 ADKP55263 362 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 PNOCQ13519 176 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 WLSQ5T9L3 541 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 METTL16Q86W50 562 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 FAM76AQ8TAV0 307 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 ZNF526Q8TF50 670 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 ZNF594Q96JF6 807 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 FSBPO95073 299 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 GGCXP38435 758 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 CABP4P57796 275 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 KRT40Q6A162 431 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 OTUD6BQ8N6M0 293 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 CENPHQ9H3R5 247 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 INTS13Q9NVM9 706 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 PAPPAQ13219 1627 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 PUS3Q9BZE2 481 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 PUS7LQ9H0K6 701 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 VIPAS39Q9H9C1 493 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 GRIN2DO15399 1336 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 STX10O60499 249 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 ZKSCAN8Q15776 578 aaPredicted RBP13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 AP1ARQ63HQ0 302 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 CCDC102BQ68D86 513 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 TTLL7Q6ZT98 887 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 CEP57Q86XR8 500 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 PLCD4Q9BRC7 762 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 KLC4Q9NSK0 619 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 ETAA1Q9NY74 926 aa13.05□□□□□ -0.32
SEC61A1-205ENST00000483956 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 EIF3HO15372 352 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 GPAA1O43292 621 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 METAP2P50579 478 aaKnown RBP eCLIP13.04□□□□□ -0.323e-7■■■■□ 19.7
SEC61A1-205ENST00000483956 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 KIAA0754O94854 1291 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 ADORA1P30542 326 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 GNGT1P63211 74 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 ADCY2Q08462 1091 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 RAB11FIP4Q86YS3 637 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
SEC61A1-205ENST00000483956 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 ZNF18P17022 549 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 CEP85LQ5SZL2 805 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 APOA5Q6Q788 366 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 TC2NQ8N9U0 490 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 ITFG2Q969R8 447 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 AIFM3Q96NN9 605 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 BSDC1Q9NW68 430 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 HOOK1Q9UJC3 728 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 AKAP11Q9UKA4 1901 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 TMCO5BA8MYB1 307 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 PDE6BP35913 854 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 STIM1Q13586 685 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 SCARF1Q14162 830 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 ZNF569Q5MCW4 686 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 FOXP4Q8IVH2 680 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 PCDHA5Q9Y5H7 936 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 STK36Q9NRP7 1315 aa13.03□□□□□ -0.32
SEC61A1-205ENST00000483956 A0A1B0GUA9 196 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 AP1G2O75843 785 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 BMP6P22004 513 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 GCKP35557 465 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 ZAP70P43403 619 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 ANKRD18AQ8IVF6 992 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 HOMEZQ8IX15 550 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 ARMC2Q8NEN0 867 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.02□□□□□ -0.323e-6■□□□□ 9.6
SEC61A1-205ENST00000483956 KIF9Q9HAQ2 790 aa13.02□□□□□ -0.32
SEC61A1-205ENST00000483956 AGPSO00116 658 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 RBM5P52756 815 aaKnown RBP eCLIP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms