RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 SEPT2Q15019 361 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 SART3Q15020 963 aaKnown RBP18.07■□□□□ 0.48
CCM2-215ENST00000482714 RAB3GAP1Q15042 981 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 FAM47AQ5JRC9 791 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 ZNF280CQ8ND82 737 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 TMEM87BQ96K49 555 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 MTMR4Q9NYA4 1195 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 AFG3L2Q9Y4W6 797 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 ZHX2Q9Y6X8 837 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 NEDD4P46934 1319 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 TTLL1O95922 423 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 ECE1P42892 770 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 JAG1P78504 1218 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
CCM2-215ENST00000482714 FBXL16Q8N461 479 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 CLMNQ96JQ2 1002 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 SH2D4AQ9H788 454 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 ELP3Q9H9T3 547 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 ARHGEF10LQ9HCE6 1279 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 ZSWIM6Q9HCJ5 1215 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 TAF6LQ9Y6J9 622 aa18.07■□□□□ 0.48
CCM2-215ENST00000482714 ERICH2A1L162 156 aa18.06■□□□□ 0.48
CCM2-215ENST00000482714 INHBEP58166 350 aa18.06■□□□□ 0.48
CCM2-215ENST00000482714 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
CCM2-215ENST00000482714 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
CCM2-215ENST00000482714 REM2Q8IYK8 340 aaPredicted RBP18.06■□□□□ 0.48
CCM2-215ENST00000482714 OPTNQ96CV9 577 aa18.06■□□□□ 0.48
CCM2-215ENST00000482714 ZSCAN10Q96SZ4 725 aaPredicted RBP18.06■□□□□ 0.48
CCM2-215ENST00000482714 UBAC1Q9BSL1 405 aa18.06■□□□□ 0.48
CCM2-215ENST00000482714 IL17RBQ9NRM6 502 aa18.06■□□□□ 0.48
CCM2-215ENST00000482714 USP17L10C9JJH3 530 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 USP14P54578 494 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 ICA1Q05084 483 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 ADCK5Q3MIX3 580 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 SPRYD7Q5W111 196 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 SIAH1Q8IUQ4 282 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 CEP95Q96GE4 821 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 JAKMIP1Q96N16 626 aaKnown RBP18.05■□□□□ 0.48
CCM2-215ENST00000482714 KCNH4Q9UQ05 1017 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 TMX2Q9Y320 296 aa18.05■□□□□ 0.48
CCM2-215ENST00000482714 LIFRP42702 1097 aa18.04■□□□□ 0.48
CCM2-215ENST00000482714 BACE1P56817 501 aa18.04■□□□□ 0.48
CCM2-215ENST00000482714 SPP2Q13103 211 aa18.04■□□□□ 0.48
CCM2-215ENST00000482714 RUFY3Q7L099 469 aa18.04■□□□□ 0.48
CCM2-215ENST00000482714 WNK4Q96J92 1243 aa18.04■□□□□ 0.48
CCM2-215ENST00000482714 KIAA1683Q9H0B3 1180 aa18.04■□□□□ 0.48
CCM2-215ENST00000482714 CYP46A1Q9Y6A2 500 aa18.04■□□□□ 0.48
CCM2-215ENST00000482714 IFIT3O14879 490 aaKnown RBP18.03■□□□□ 0.48
CCM2-215ENST00000482714 IRF6O14896 467 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 PRC1O43663 620 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 SLC10A3P09131 477 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 TOP1P11387 765 aaKnown RBP18.03■□□□□ 0.48
CCM2-215ENST00000482714 EEF2P13639 858 aaKnown RBP18.03■□□□□ 0.48
CCM2-215ENST00000482714 GTF2A2P52657 109 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 SH3D19Q5HYK7 790 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 CYB5R4Q7L1T6 521 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 IGDCC4Q8TDY8 1250 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 ALDH8A1Q9H2A2 487 aaPredicted RBP18.03■□□□□ 0.48
CCM2-215ENST00000482714 CLIP2Q9UDT6 1046 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 STX8Q9UNK0 236 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 MYH8P13535 1937 aa18.03■□□□□ 0.48
CCM2-215ENST00000482714 RPS6KB1P23443 525 aa18.02■□□□□ 0.48
CCM2-215ENST00000482714 NOGQ13253 232 aa18.02■□□□□ 0.48
CCM2-215ENST00000482714 SNAPC2Q13487 334 aa18.02■□□□□ 0.48
CCM2-215ENST00000482714 SEC23AQ15436 765 aa18.02■□□□□ 0.48
CCM2-215ENST00000482714 FASTKD5Q7L8L6 764 aaKnown RBP18.02■□□□□ 0.48
CCM2-215ENST00000482714 RASAL3Q86YV0 1011 aa18.02■□□□□ 0.48
CCM2-215ENST00000482714 OTUD5Q96G74 571 aa18.02■□□□□ 0.48
CCM2-215ENST00000482714 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
CCM2-215ENST00000482714 FAM155AB1AL88 458 aaPredicted RBP18.01■□□□□ 0.47
CCM2-215ENST00000482714 CASTP20810 708 aaKnown RBP18.01■□□□□ 0.47
CCM2-215ENST00000482714 RCSD1Q6JBY9 416 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 USP17L2Q6R6M4 530 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 LPAR1Q92633 364 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 C12orf42Q96LP6 360 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 DOCK1Q14185 1865 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 TNKSO95271 1327 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 A0A1W2PRG0 241 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 TESPA1A2RU30 521 aaPredicted RBP18.01■□□□□ 0.47
CCM2-215ENST00000482714 CETPP11597 493 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 MAP2K2P36507 400 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 ANTXR2P58335 489 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 WTAPQ15007 396 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 SHROOM1Q2M3G4 852 aaPredicted RBP18.01■□□□□ 0.47
CCM2-215ENST00000482714 TMEM67Q5HYA8 995 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 IFIT1BQ5T764 474 aaKnown RBP18.01■□□□□ 0.47
CCM2-215ENST00000482714 ENAHQ8N8S7 591 aaPredicted RBP18.01■□□□□ 0.47
CCM2-215ENST00000482714 GMCL1P1Q8NEA9 526 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 NKX2-3Q8TAU0 364 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 TMEM47Q9BQJ4 181 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 GOPCQ9HD26 462 aa18.01■□□□□ 0.47
CCM2-215ENST00000482714 PCNTO95613 3336 aa18■□□□□ 0.47
CCM2-215ENST00000482714 A0A0G2JLL6 359 aaPredicted RBP18■□□□□ 0.47
CCM2-215ENST00000482714 NMT2O60551 498 aa18■□□□□ 0.47
CCM2-215ENST00000482714 PRRT2Q7Z6L0 340 aaPredicted RBP18■□□□□ 0.47
CCM2-215ENST00000482714 SGMS1Q86VZ5 419 aa18■□□□□ 0.47
CCM2-215ENST00000482714 PROCA1Q8NCQ7 364 aaPredicted RBP18■□□□□ 0.47
CCM2-215ENST00000482714 ACER1Q8TDN7 264 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms