RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 EVI5LQ96CN4 794 aa19.84■□□□□ 0.77
VAMP4-204ENST00000482519 ARPP21Q9UBL0 812 aaPredicted RBP19.84■□□□□ 0.77
VAMP4-204ENST00000482519 AKR1B1P15121 316 aa19.83■□□□□ 0.77
VAMP4-204ENST00000482519 GNAT2P19087 354 aa19.83■□□□□ 0.77
VAMP4-204ENST00000482519 HOXD10P28358 340 aa19.83■□□□□ 0.77
VAMP4-204ENST00000482519 GUCY1A2P33402 732 aa19.83■□□□□ 0.77
VAMP4-204ENST00000482519 SLC9C1Q4G0N8 1177 aa19.83■□□□□ 0.77
VAMP4-204ENST00000482519 ZMYM1Q5SVZ6 1142 aa19.83■□□□□ 0.77
VAMP4-204ENST00000482519 TRIM6-TRIM34B2RNG4 842 aa19.82■□□□□ 0.76
VAMP4-204ENST00000482519 MYCP01106 439 aaPredicted RBP19.82■□□□□ 0.76
VAMP4-204ENST00000482519 GCLCP48506 637 aaPredicted RBP19.82■□□□□ 0.76
VAMP4-204ENST00000482519 USP14P54578 494 aa19.82■□□□□ 0.76
VAMP4-204ENST00000482519 TMEM179Q6ZVK1 233 aa19.82■□□□□ 0.76
VAMP4-204ENST00000482519 C16orf86Q6ZW13 317 aa19.82■□□□□ 0.76
VAMP4-204ENST00000482519 P2RX7Q99572 595 aaKnown RBP19.82■□□□□ 0.76
VAMP4-204ENST00000482519 MYPNQ86TC9 1320 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 PATL2C9JE40 543 aaKnown RBP19.81■□□□□ 0.76
VAMP4-204ENST00000482519 TNPO2O14787 897 aaKnown RBP19.81■□□□□ 0.76
VAMP4-204ENST00000482519 HOXA7P31268 230 aaPredicted RBP19.81■□□□□ 0.76
VAMP4-204ENST00000482519 GIMAP6Q6P9H5 292 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 RAET1EQ8TD07 263 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 RILPL2Q969X0 211 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 NACAP1Q9BZK3 213 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 KIAA1683Q9H0B3 1180 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 EPB41L4AQ9HCS5 686 aaPredicted RBP19.81■□□□□ 0.76
VAMP4-204ENST00000482519 SRRDQ9UH36 339 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 TAOK2Q9UL54 1235 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 MGAMO43451 1857 aa19.81■□□□□ 0.76
VAMP4-204ENST00000482519 HTTP42858 3142 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 PRMT2P55345 433 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 HERVK_113P62684 666 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 ATP2B2Q01814 1243 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 PRKCZQ05513 592 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 FAM110CQ1W6H9 321 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 SBK1Q52WX2 424 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 CCDC129Q6ZRS4 1044 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 NBPF11Q86T75 865 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 CLEC10AQ8IUN9 316 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 PLEKHM2Q8IWE5 1019 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 IFNL3Q8IZI9 196 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 SH3TC2Q8TF17 1288 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 CCDC17Q96LX7 622 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 MKNK2Q9HBH9 465 aa19.8■□□□□ 0.76
VAMP4-204ENST00000482519 PEX10O60683 326 aa19.79■□□□□ 0.76
VAMP4-204ENST00000482519 VCAM1P19320 739 aa19.79■□□□□ 0.76
VAMP4-204ENST00000482519 MLLT1Q03111 559 aaPredicted RBP19.79■□□□□ 0.76
VAMP4-204ENST00000482519 ICA1Q05084 483 aa19.79■□□□□ 0.76
VAMP4-204ENST00000482519 A0A1W2PRG0 241 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L15C9J2P7 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L13C9JLJ4 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L11C9JVI0 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L18D6R9N7 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L22D6RA61 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L17D6RBQ6 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L19D6RCP7 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L20D6RJB6 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 RGS19P49795 217 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 USP17L24Q0WX57 530 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 ARMC5Q96C12 935 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 C12orf42Q96LP6 360 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 PAGR1Q9BTK6 254 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 NAPBQ9H115 298 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 RPAP3Q9H6T3 665 aaPredicted RBP19.78■□□□□ 0.76
VAMP4-204ENST00000482519 ARHGEF10LQ9HCE6 1279 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 GABRQQ9UN88 632 aa19.78■□□□□ 0.76
VAMP4-204ENST00000482519 GPRC5AQ8NFJ5 357 aa19.77■□□□□ 0.76
VAMP4-204ENST00000482519 COA7Q96BR5 231 aa19.77■□□□□ 0.76
VAMP4-204ENST00000482519 BIN2Q9UBW5 565 aaPredicted RBP19.77■□□□□ 0.76
VAMP4-204ENST00000482519 CENPFP49454 3210 aa19.77■□□□□ 0.75
VAMP4-204ENST00000482519 PRDM1O75626 825 aa19.76■□□□□ 0.75
VAMP4-204ENST00000482519 CCAR1Q8IX12 1150 aaKnown RBP19.76■□□□□ 0.75
VAMP4-204ENST00000482519 ZNF333Q96JL9 665 aa19.76■□□□□ 0.75
VAMP4-204ENST00000482519 FAM227BQ96M60 508 aa19.76■□□□□ 0.75
VAMP4-204ENST00000482519 TANGO6Q9C0B7 1094 aa19.76■□□□□ 0.75
VAMP4-204ENST00000482519 TXNRD2Q9NNW7 524 aa19.76■□□□□ 0.75
VAMP4-204ENST00000482519 HELLSQ9NRZ9 838 aa19.76■□□□□ 0.75
VAMP4-204ENST00000482519 RAD21O60216 631 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 EEF2P13639 858 aaKnown RBP19.75■□□□□ 0.75
VAMP4-204ENST00000482519 FLT3LGP49771 235 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 CATSPERGQ6ZRH7 1159 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 SIAH1Q8IUQ4 282 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 ZNF444Q8N0Y2 327 aaPredicted RBP19.75■□□□□ 0.75
VAMP4-204ENST00000482519 SPICE1Q8N0Z3 855 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 TMEM106CQ9BVX2 250 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 SH2D4AQ9H788 454 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 KANSL2Q9H9L4 492 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 ZNF287Q9HBT7 754 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 RBPJLQ9UBG7 517 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 MORF4L1Q9UBU8 362 aa19.75■□□□□ 0.75
VAMP4-204ENST00000482519 A0A0D9SFI3 127 aa19.74■□□□□ 0.75
VAMP4-204ENST00000482519 POTEFA5A3E0 1075 aa19.74■□□□□ 0.75
VAMP4-204ENST00000482519 SLC3A2P08195 630 aaKnown RBP19.74■□□□□ 0.75
VAMP4-204ENST00000482519 RASA1P20936 1047 aa19.74■□□□□ 0.75
VAMP4-204ENST00000482519 GRK4P32298 578 aa19.74■□□□□ 0.75
VAMP4-204ENST00000482519 NMIQ13287 307 aaPredicted RBP19.74■□□□□ 0.75
VAMP4-204ENST00000482519 MCMDC2Q4G0Z9 681 aa19.74■□□□□ 0.75
VAMP4-204ENST00000482519 OSBPL3Q9H4L5 887 aa19.74■□□□□ 0.75
VAMP4-204ENST00000482519 ROBO3Q96MS0 1386 aa19.73■□□□□ 0.75
VAMP4-204ENST00000482519 ADCY3O60266 1144 aa19.73■□□□□ 0.75
VAMP4-204ENST00000482519 PPARAQ07869 468 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms