RNA–Protein interactions for RNA: ENST00000482215.3

RN7SL553P-201, Transcript of RNA, 7SL, cytoplasmic 553, pseudogene, humanhuman

BASIC

Gene RN7SL553P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL553P-201ENST00000482215 CLTBP09497 229 aa13.18□□□□□ -0.3
RN7SL553P-201ENST00000482215 PBX2P40425 430 aa13.18□□□□□ -0.3
RN7SL553P-201ENST00000482215 CCNA1P78396 465 aa13.18□□□□□ -0.3
RN7SL553P-201ENST00000482215 LRRC41Q15345 812 aa13.18□□□□□ -0.3
RN7SL553P-201ENST00000482215 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
RN7SL553P-201ENST00000482215 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
RN7SL553P-201ENST00000482215 TACC3Q9Y6A5 838 aa13.18□□□□□ -0.3
RN7SL553P-201ENST00000482215 PDS5AQ29RF7 1337 aaKnown RBP13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 CDK5RAP2Q96SN8 1893 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 RAG1P15918 1043 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 FPGSQ05932 587 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 ERICH6Q7L0X2 663 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 IL27Q8NEV9 243 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 ARIH1Q9Y4X5 557 aaPredicted RBP13.17□□□□□ -0.3
RN7SL553P-201ENST00000482215 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 REV3LO60673 3130 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 GRXCR1A8MXD5 290 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 SEPT4O43236 478 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 CIAO1O76071 339 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 LRFN3Q9BTN0 628 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 PBX4Q9BYU1 374 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 IVNS1ABPQ9Y6Y0 642 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 CHD7Q9P2D1 2997 aa13.16□□□□□ -0.3
RN7SL553P-201ENST00000482215 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 BMP1P13497 986 aa13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 ZYXQ15942 572 aaKnown RBP13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 OLFML2BQ68BL8 750 aa13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 NSUN4Q96CB9 384 aaKnown RBP13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 EPHX3Q9H6B9 360 aa13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 PHF24Q9UPV7 400 aa13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 HCN4Q9Y3Q4 1203 aa13.15□□□□□ -0.3
RN7SL553P-201ENST00000482215 GBF1Q92538 1859 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 FOCADQ5VW36 1801 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 PQBP1O60828 265 aaKnown RBP13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 IGFBP4P22692 258 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 TIMM10P62072 90 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 PI16Q6UXB8 463 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 TBC1D9Q6ZT07 1266 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 C12orf42Q96LP6 360 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 DHX36Q9H2U1 1008 aaKnown RBP13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 TMEM39AQ9NV64 488 aa13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
RN7SL553P-201ENST00000482215 COBLO75128 1261 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 LDHCP07864 332 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 ADORA2AP29274 412 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 GSTO1P78417 241 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 TFF2Q03403 129 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 LBX2Q6XYB7 198 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 CCDC129Q6ZRS4 1044 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 C16orf59Q7L2K0 433 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 CXXC1Q9P0U4 656 aaPredicted RBP13.13□□□□□ -0.31
RN7SL553P-201ENST00000482215 ZNFX1Q9P2E3 1918 aaKnown RBP13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 SPDYE16A6NNV3 312 aaPredicted RBP13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 GH2P01242 217 aa13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 IL15P40933 162 aaPredicted RBP13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 FAAP100Q0VG06 881 aa13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 RASIP1Q5U651 963 aa13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 XIRP2A4UGR9 3374 aa13.12□□□□□ -0.31
RN7SL553P-201ENST00000482215 A0A1W2PQ45 241 aaPredicted RBP13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 A0A1W2PQY0 241 aa13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 VCAM1P19320 739 aa13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 KCNQ1P51787 676 aa13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 TMEM240Q5SV17 173 aa13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 ALYREFQ86V81 257 aaKnown RBP13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 MRPL50Q8N5N7 158 aaKnown RBP13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
RN7SL553P-201ENST00000482215 FEZ1Q99689 392 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms