RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TNRQ92752 1358 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 CEP104O60308 925 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 DNAJC8O75937 253 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 ZNF853P0CG23 659 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 SMTNP53814 917 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 UBE3CQ15386 1083 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 CFAP157Q5JU67 520 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 ISM2Q6H9L7 571 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 TPTE2Q6XPS3 522 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 ZCRB1Q8TBF4 217 aaKnown RBP6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 ZKSCAN3Q9BRR0 538 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 PPP1R12CQ9BZL4 782 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 RIC8AQ9NPQ8 531 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 AMFRQ9UKV5 643 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 MAP3K19Q56UN5 1328 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 KDM3AQ9Y4C1 1321 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 RBM5P52756 815 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ZNF518AQ6AHZ1 1483 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 MICAL1Q8TDZ2 1067 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 UBLCP1Q8WVY7 318 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 TEKT1Q969V4 418 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 SYNCQ9H7C4 482 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ANKIB1Q9P2G1 1089 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 A0A1W2PP64 1363 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 RPAP1Q9BWH6 1393 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ATP5J2-PTCD1G3V325 749 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ASIC2Q16515 512 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 TSHZ3Q63HK5 1081 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 GSTA5Q7RTV2 222 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 LPIN2Q92539 896 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 USP28Q96RU2 1077 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 LRRC2Q9BYS8 371 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 I3L4J1 428 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 LONP1P36776 959 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 BPIFB4P59827 614 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 YWHAEP62258 255 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 RPGRQ92834 1020 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 SPZ1Q9BXG8 430 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ATG3Q9NT62 314 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ATP8A2Q9NTI2 1148 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 MAGEA9P43362 315 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 GNGT1P63211 74 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 WDR44Q5JSH3 913 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 AKNAD1Q5T1N1 836 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 DENND2CQ68D51 928 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 SLC17A8Q8NDX2 589 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ZC3H15Q8WU90 426 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 CAPZA3Q96KX2 299 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 PANX2Q96RD6 677 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 LARP6Q9BRS8 491 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 OSBPL5Q9H0X9 879 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 BAIAP2L1Q9UHR4 511 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 VWA3AA6NCI4 1184 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 SART1O43290 800 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 PFKFB1P16118 471 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ZBED6P86452 979 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 GCKRQ14397 625 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 KRT28Q7Z3Y7 464 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ZNF804AQ7Z570 1209 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 SDCCAG8Q86SQ7 713 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ZNF622Q969S3 477 aaKnown RBP eCLIP6.81□□□□□ -1.321e-7■■■□□ 18.8
PRPF4B-205ENST00000480058 RNF26Q9BY78 433 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 NUP153P49790 1475 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 BIVM-ERCC5R4GMW8 1640 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 POLR2DO15514 142 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 THAP12O43422 761 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 SLFN14P0C7P3 912 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 STX2P32856 288 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 PUM3Q15397 648 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ZKSCAN8Q15776 578 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 TBC1D22AQ8WUA7 517 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC85AQ96PX6 553 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 USP44Q9H0E7 712 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 VPS16Q9H269 839 aa6.81□□□□□ -1.32
PRPF4B-205ENST00000480058 ATP10BO94823 1461 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 PZPP20742 1482 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 LRRD1A4D1F6 860 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 EIF3CLB5ME19 914 aaKnown RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 TNNI2P48788 182 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 ARHGAP4P98171 946 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 ICE2Q659A1 982 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 HEATR3Q7Z4Q2 680 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 PODNQ7Z5L7 613 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 EIF3CQ99613 913 aaKnown RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 CARD10Q9BWT7 1032 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 NUF2Q9BZD4 464 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 FOXP1Q9H334 677 aaPredicted RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 FAM204AQ9H8W3 233 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 RRP15Q9Y3B9 282 aaKnown RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 GPAA1O43292 621 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 FOSP01100 380 aaPredicted RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 ABCD1P33897 745 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 CTNNA1P35221 906 aaKnown RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 DEUP1Q05D60 604 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 GBP5Q96PP8 586 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 EYA3Q99504 573 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 SLF1Q9BQI6 1058 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 DBNDD2Q9BQY9 259 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 ARMCX3Q9UH62 379 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms