RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 TMCC3Q9ULS5 477 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 TMCO1Q9UM00 188 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
NUP35-209ENST00000479162 MEFVO15553 781 aaPredicted RBP11.74□□□□□ -0.53
NUP35-209ENST00000479162 AKR1B10O60218 316 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 ENDOUP21128 410 aaKnown RBP11.74□□□□□ -0.53
NUP35-209ENST00000479162 IFFO1Q0D2I5 559 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 MAIP1Q8WWC4 291 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 GSDMAQ96QA5 445 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 C2orf49Q9BVC5 232 aaPredicted RBP11.74□□□□□ -0.53
NUP35-209ENST00000479162 INO80BQ9C086 356 aaPredicted RBP11.74□□□□□ -0.53
NUP35-209ENST00000479162 TIMM22Q9Y584 194 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 CTCFP49711 727 aaPredicted RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 LRRC8AQ8IWT6 810 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 GBP3Q9H0R5 595 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 CFAP45Q9UL16 551 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 TARSL2A2RTX5 802 aaKnown RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 TMEM247A6NEH6 219 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 SHOX2O60902 331 aaPredicted RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 N4BP1O75113 896 aaKnown RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 CEBPAP49715 358 aaPredicted RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 BLMHQ13867 455 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 INAQ16352 499 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 LRRFIP1Q32MZ4 808 aaKnown RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 PPP2R3CQ969Q6 453 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 NAP1L3Q99457 506 aaPredicted RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 AASDHPPTQ9NRN7 309 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 ANO10Q9NW15 660 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 DDX25Q9UHL0 483 aaKnown RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 TTC41PQ6P2S7 1318 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 GOLGA6L7A0A1B0GV03 622 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 PDGFRBP09619 1106 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 HSPA8P11142 646 aaKnown RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 ERCC5P28715 1186 aaPredicted RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 CNGA1P29973 690 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 GNL2Q13823 731 aaKnown RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 PRPF40BQ6NWY9 871 aaKnown RBP11.73□□□□□ -0.53
NUP35-209ENST00000479162 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 PI16Q6UXB8 463 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 LUZP1Q86V48 1076 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 FAM228AQ86W67 206 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 WDR66Q8TBY9 1149 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 TBC1D31Q96DN5 1066 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.53
NUP35-209ENST00000479162 ZNF304Q9HCX3 659 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 PCMTD2Q9NV79 361 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 ZFATQ9P243 1243 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 WDR35Q9P2L0 1181 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 DKK3Q9UBP4 350 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 TTLL3Q9Y4R7 772 aa11.73□□□□□ -0.53
NUP35-209ENST00000479162 NDUFAB1O14561 156 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 CCDC166P0CW27 439 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 MLH1P40692 756 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 AMPHP49418 695 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 YTHDF3Q7Z739 585 aaKnown RBP11.72□□□□□ -0.53
NUP35-209ENST00000479162 MIGA1Q8NAN2 632 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 HNRNPLLQ8WVV9 542 aaKnown RBP11.72□□□□□ -0.53
NUP35-209ENST00000479162 CENPTQ96BT3 561 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 FUCA2Q9BTY2 467 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 MRPL46Q9H2W6 279 aaKnown RBP11.72□□□□□ -0.53
NUP35-209ENST00000479162 DLC1Q96QB1 1528 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 LINC00854A0A1B0GVQ3 168 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 PFDN1O60925 122 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 LUC7L3O95232 432 aaKnown RBP11.72□□□□□ -0.53
NUP35-209ENST00000479162 ATP5JP18859 108 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 ZNF75DP51815 510 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 PPP2R5BQ15173 497 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 CYB5D1Q6P9G0 228 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 TEKT4Q8WW24 435 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 SMARCC1Q92922 1105 aaPredicted RBP11.72□□□□□ -0.53
NUP35-209ENST00000479162 ATP6V0A1Q93050 837 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 PPP1R14BQ96C90 147 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
NUP35-209ENST00000479162 TRIM5Q9C035 493 aa11.72□□□□□ -0.53
NUP35-209ENST00000479162 RASSF10A6NK89 507 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 MGRN1O60291 552 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 BUB1BO60566 1050 aaPredicted RBP11.71□□□□□ -0.53
NUP35-209ENST00000479162 ALDH3A1P30838 453 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 MAP7Q14244 749 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 NEUROD2Q15784 382 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 NUTM2DQ5VT03 806 aaPredicted RBP11.71□□□□□ -0.53
NUP35-209ENST00000479162 BPHLQ86WA6 291 aaPredicted RBP11.71□□□□□ -0.53
NUP35-209ENST00000479162 SMC1BQ8NDV3 1235 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 RABGGTAQ92696 567 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 CHAMP1Q96JM3 812 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 CARD11Q9BXL7 1154 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 EBF2Q9HAK2 575 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 GABBR1Q9UBS5 961 aa11.71□□□□□ -0.53
NUP35-209ENST00000479162 NUTM2FA1L443 756 aa11.71□□□□□ -0.54
NUP35-209ENST00000479162 STAM2O75886 525 aa11.71□□□□□ -0.54
NUP35-209ENST00000479162 HSPA1AP0DMV8 641 aaKnown RBP11.71□□□□□ -0.54
NUP35-209ENST00000479162 HSPA1BP0DMV9 641 aaKnown RBP11.71□□□□□ -0.54
NUP35-209ENST00000479162 SCG2P13521 617 aa11.71□□□□□ -0.54
NUP35-209ENST00000479162 WASHC5Q12768 1159 aa11.71□□□□□ -0.54
NUP35-209ENST00000479162 IDI1Q13907 227 aa11.71□□□□□ -0.54
NUP35-209ENST00000479162 PLA2G4DQ86XP0 818 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms