RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.54
TCTN3-205ENST00000478245 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 DPP9Q86TI2 863 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 WDR63Q8IWG1 891 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 TEX11Q8IYF3 940 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 CRACR2BQ8N4Y2 399 aaPredicted RBP11.65□□□□□ -0.54
TCTN3-205ENST00000478245 NOL10Q9BSC4 688 aaKnown RBP11.65□□□□□ -0.54
TCTN3-205ENST00000478245 PRDM12Q9H4Q4 367 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 PDS5AQ29RF7 1337 aaKnown RBP11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 CIAO1O76071 339 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 GDF11O95390 407 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 IGFBP4P22692 258 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 ITGB8P26012 769 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 GRB14Q14449 540 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 FEZ1Q99689 392 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 USP44Q9H0E7 712 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
TCTN3-205ENST00000478245 DHX36Q9H2U1 1008 aaKnown RBP11.64□□□□□ -0.55
TCTN3-205ENST00000478245 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
TCTN3-205ENST00000478245 SYNGAP1Q96PV0 1343 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 REV3LO60673 3130 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 KIAA0355O15063 1070 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 SEPT4O43236 478 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 PQBP1O60828 265 aaKnown RBP11.63□□□□□ -0.55
TCTN3-205ENST00000478245 CNMDO75829 334 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
TCTN3-205ENST00000478245 JAG1P78504 1218 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 LRRC41Q15345 812 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 ZYXQ15942 572 aaKnown RBP11.63□□□□□ -0.55
TCTN3-205ENST00000478245 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 TMEM39AQ9NV64 488 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 RAI14Q9P0K7 980 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 ZBTB21Q9ULJ3 1066 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 ARIH1Q9Y4X5 557 aaPredicted RBP11.63□□□□□ -0.55
TCTN3-205ENST00000478245 GBF1Q92538 1859 aa11.63□□□□□ -0.55
TCTN3-205ENST00000478245 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
TCTN3-205ENST00000478245 OLFML2BQ68BL8 750 aa11.62□□□□□ -0.55
TCTN3-205ENST00000478245 FOXP4Q8IVH2 680 aaPredicted RBP11.62□□□□□ -0.55
TCTN3-205ENST00000478245 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
TCTN3-205ENST00000478245 ZNF384Q8TF68 577 aa11.62□□□□□ -0.55
TCTN3-205ENST00000478245 NECAB3Q96P71 396 aaPredicted RBP11.62□□□□□ -0.55
TCTN3-205ENST00000478245 FOCADQ5VW36 1801 aa11.62□□□□□ -0.55
TCTN3-205ENST00000478245 CHD7Q9P2D1 2997 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 MYH1P12882 1939 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 ZBTB22O15209 634 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 ADORA2AP29274 412 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 TIMM10P62072 90 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 FAM47AQ5JRC9 791 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 CCDC174Q6PII3 467 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 CATSPERGQ6ZRH7 1159 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 SLC44A5Q8NCS7 719 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 NSUN4Q96CB9 384 aaKnown RBP11.61□□□□□ -0.55
TCTN3-205ENST00000478245 SLC5A4Q9NY91 659 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 BTBD7Q9P203 1132 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 PHF24Q9UPV7 400 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 TRANK1O15050 2925 aa11.61□□□□□ -0.55
TCTN3-205ENST00000478245 ZNF236Q9UL36 1845 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 GRXCR1A8MXD5 290 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 DCDC2CA8MYV0 355 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 STRNO43815 780 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 PBX2P40425 430 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 MVPQ14764 893 aaKnown RBP11.6□□□□□ -0.55
TCTN3-205ENST00000478245 AAK1Q2M2I8 961 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 CCDC184Q52MB2 194 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 ATF7IPQ6VMQ6 1270 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 TBC1D9Q6ZT07 1266 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 MAPKAPK5Q8IW41 473 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 TGFBRAP1Q8WUH2 860 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.6□□□□□ -0.55
TCTN3-205ENST00000478245 LRFN3Q9BTN0 628 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 PBX4Q9BYU1 374 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 DNAJC18Q9H819 358 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 MSRAQ9UJ68 235 aa11.6□□□□□ -0.55
TCTN3-205ENST00000478245 PRRC2BQ5JSZ5 2229 aaKnown RBP11.59□□□□□ -0.55
TCTN3-205ENST00000478245 BAG3O95817 575 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 GH2P01242 217 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 IGHA2P01877 340 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 RARBP10826 455 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 PLCG2P16885 1265 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 USP14P54578 494 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 ADGRE1Q14246 886 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 GORABQ5T7V8 394 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 RNF180Q86T96 592 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 C12orf42Q96LP6 360 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms