RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 GPATCH3Q96I76 525 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 HAUS7Q99871 368 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.81
ERCC8-205ENST00000477893 CRNKL1Q9BZJ0 848 aaKnown RBP10.02□□□□□ -0.81
ERCC8-205ENST00000477893 DCTPP1Q9H773 170 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 ECHDC1Q9NTX5 307 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 FOCADQ5VW36 1801 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 NAV1Q8NEY1 1877 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 ATAD5Q96QE3 1844 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 TCRBV5S4A2TA0A5A2 114 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 USP17L5A8MUK1 530 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 PRKAB2O43741 272 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 CYP2D6P10635 497 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 LACTBP83111 547 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-205ENST00000477893 MTMR2Q13614 643 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 ZYXQ15942 572 aaKnown RBP10.01□□□□□ -0.81
ERCC8-205ENST00000477893 FASTKD5Q7L8L6 764 aaKnown RBP10.01□□□□□ -0.81
ERCC8-205ENST00000477893 ZNF280CQ8ND82 737 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 OTUD7AQ8TE49 926 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-205ENST00000477893 SMCR8Q8TEV9 937 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-205ENST00000477893 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.01□□□□□ -0.81
ERCC8-205ENST00000477893 MCM9Q9NXL9 1143 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 ZBTB21Q9ULJ3 1066 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 PTPN22Q9Y2R2 807 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 PTCH2Q9Y6C5 1203 aa10.01□□□□□ -0.81
ERCC8-205ENST00000477893 HTTP42858 3142 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 MPHOSPH10O00566 681 aaKnown RBP10□□□□□ -0.81
ERCC8-205ENST00000477893 FMNL1O95466 1100 aaPredicted RBP10□□□□□ -0.81
ERCC8-205ENST00000477893 GH2P01242 217 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 CTGFP29279 349 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 ADD2P35612 726 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 PSMC4P43686 418 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 PLCD1P51178 756 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 MLLT1Q03111 559 aaPredicted RBP10□□□□□ -0.81
ERCC8-205ENST00000477893 RAB3GAP1Q15042 981 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 CERS3Q8IU89 383 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 AS3MTQ9HBK9 375 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 ZCCHC17Q9NP64 241 aaKnown RBP10□□□□□ -0.81
ERCC8-205ENST00000477893 SERPINB13Q9UIV8 391 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 AGTPBP1Q9UPW5 1226 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 ADGRA2Q96PE1 1338 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 PHIPQ8WWQ0 1821 aa10□□□□□ -0.81
ERCC8-205ENST00000477893 MYH1P12882 1939 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 CYP2D7A0A087X1C5 515 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 IGSF3O75054 1194 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 RGS20O76081 388 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 ASNSP08243 561 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 SLC9C1Q4G0N8 1177 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 C17orf99Q6UX52 265 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 TTC6Q86TZ1 520 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 FOXP4Q8IVH2 680 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-205ENST00000477893 STK11IPQ8N1F8 1099 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 ANKRD13CQ8N6S4 541 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 SLC44A5Q8NCS7 719 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 SH3TC2Q8TF17 1288 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 DYNLL2Q96FJ2 89 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 TRIM47Q96LD4 638 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 FEZ1Q99689 392 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 TMOD4Q9NZQ9 345 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 TAOK2Q9UL54 1235 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 SLC4A4Q9Y6R1 1079 aa9.99□□□□□ -0.81
ERCC8-205ENST00000477893 DDX60LQ5H9U9 1706 aaKnown RBP9.99□□□□□ -0.81
ERCC8-205ENST00000477893 PEX10O60683 326 aa9.98□□□□□ -0.81
ERCC8-205ENST00000477893 SHMT1P34896 483 aa9.98□□□□□ -0.81
ERCC8-205ENST00000477893 IRX6P78412 446 aaPredicted RBP9.98□□□□□ -0.81
ERCC8-205ENST00000477893 ARHGEF6Q15052 776 aa9.98□□□□□ -0.81
ERCC8-205ENST00000477893 ABCB5Q2M3G0 1257 aa9.98□□□□□ -0.81
ERCC8-205ENST00000477893 CERKLQ49MI3 558 aaPredicted RBP9.98□□□□□ -0.81
ERCC8-205ENST00000477893 ANKRD45Q5TZF3 282 aa9.98□□□□□ -0.81
ERCC8-205ENST00000477893 ZSCAN25Q6NSZ9 544 aa9.98□□□□□ -0.81
ERCC8-205ENST00000477893 PUS7LQ9H0K6 701 aaKnown RBP9.98□□□□□ -0.81
ERCC8-205ENST00000477893 DCP1AQ9NPI6 582 aaPredicted RBP9.98□□□□□ -0.81
ERCC8-205ENST00000477893 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
ERCC8-205ENST00000477893 MYPNQ86TC9 1320 aa9.98□□□□□ -0.81
ERCC8-205ENST00000477893 PTPRFP10586 1907 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 LOC285556D6RIA3 1793 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 SMIM22K7EJ46 135 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 BCRP11274 1271 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 MX1P20591 662 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 OSBPP22059 807 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 FCGRTP55899 365 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 BACE1P56817 501 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 IRX3P78415 501 aaPredicted RBP9.97□□□□□ -0.81
ERCC8-205ENST00000477893 PRKCZQ05513 592 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 UBE3CQ15386 1083 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 PPP4R3BQ5MIZ7 849 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 B4GALNT3Q6L9W6 998 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 TMED8Q6PL24 325 aaPredicted RBP9.97□□□□□ -0.81
ERCC8-205ENST00000477893 METTL16Q86W50 562 aaKnown RBP9.97□□□□□ -0.81
ERCC8-205ENST00000477893 CLEC10AQ8IUN9 316 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 PROCA1Q8NCQ7 364 aaPredicted RBP9.97□□□□□ -0.81
ERCC8-205ENST00000477893 EXOC6Q8TAG9 804 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 RAET1EQ8TD07 263 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 FSD1Q9BTV5 496 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 ASCC2Q9H1I8 757 aaPredicted RBP9.97□□□□□ -0.81
ERCC8-205ENST00000477893 EHD4Q9H223 541 aa9.97□□□□□ -0.81
ERCC8-205ENST00000477893 USP17L10C9JJH3 530 aa9.96□□□□□ -0.82
ERCC8-205ENST00000477893 M0R2C6 588 aa9.96□□□□□ -0.82
ERCC8-205ENST00000477893 TNPO2O14787 897 aaKnown RBP9.96□□□□□ -0.82
ERCC8-205ENST00000477893 PABPC4Q13310 644 aaKnown RBP eCLIP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms