RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 GABRQQ9UN88 632 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 MGAMO43451 1857 aa18.69■□□□□ 0.58
COMMD6-209ENST00000477377 NUCB1Q02818 461 aa18.69■□□□□ 0.58
COMMD6-209ENST00000477377 FAM110CQ1W6H9 321 aa18.69■□□□□ 0.58
COMMD6-209ENST00000477377 KIAA1755Q5JYT7 1200 aa18.69■□□□□ 0.58
COMMD6-209ENST00000477377 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
COMMD6-209ENST00000477377 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
COMMD6-209ENST00000477377 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.69■□□□□ 0.58
COMMD6-209ENST00000477377 TXNRD2Q9NNW7 524 aa18.69■□□□□ 0.58
COMMD6-209ENST00000477377 CABP5Q9NP86 173 aa18.69■□□□□ 0.58
COMMD6-209ENST00000477377 TMOD4Q9NZQ9 345 aa18.69■□□□□ 0.58
COMMD6-209ENST00000477377 MKI67P46013 3256 aaKnown RBP18.69■□□□□ 0.58
COMMD6-209ENST00000477377 FMNL1O95466 1100 aaPredicted RBP18.68■□□□□ 0.58
COMMD6-209ENST00000477377 PRMT2P55345 433 aa18.68■□□□□ 0.58
COMMD6-209ENST00000477377 CHD1LQ86WJ1 897 aa18.68■□□□□ 0.58
COMMD6-209ENST00000477377 CLEC10AQ8IUN9 316 aa18.68■□□□□ 0.58
COMMD6-209ENST00000477377 PLEKHM2Q8IWE5 1019 aa18.68■□□□□ 0.58
COMMD6-209ENST00000477377 FSD1Q9BTV5 496 aa18.68■□□□□ 0.58
COMMD6-209ENST00000477377 RBPJLQ9UBG7 517 aa18.68■□□□□ 0.58
COMMD6-209ENST00000477377 MORF4L1Q9UBU8 362 aa18.68■□□□□ 0.58
COMMD6-209ENST00000477377 DOCK3Q8IZD9 2030 aa18.67■□□□□ 0.58
COMMD6-209ENST00000477377 POTEFA5A3E0 1075 aa18.67■□□□□ 0.58
COMMD6-209ENST00000477377 PATL2C9JE40 543 aaKnown RBP18.67■□□□□ 0.58
COMMD6-209ENST00000477377 GCLCP48506 637 aaPredicted RBP18.67■□□□□ 0.58
COMMD6-209ENST00000477377 FCGRTP55899 365 aa18.67■□□□□ 0.58
COMMD6-209ENST00000477377 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
COMMD6-209ENST00000477377 PRKCZQ05513 592 aa18.67■□□□□ 0.58
COMMD6-209ENST00000477377 PABPC4Q13310 644 aaKnown RBP eCLIP18.67■□□□□ 0.585e-7■□□□□ 10
COMMD6-209ENST00000477377 ZYXQ15942 572 aaKnown RBP18.67■□□□□ 0.58
COMMD6-209ENST00000477377 Q3C1V9 767 aa18.67■□□□□ 0.58
COMMD6-209ENST00000477377 CATSPERGQ6ZRH7 1159 aa18.67■□□□□ 0.58
COMMD6-209ENST00000477377 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
COMMD6-209ENST00000477377 OSBPL3Q9H4L5 887 aa18.67■□□□□ 0.58
COMMD6-209ENST00000477377 ARPP21Q9UBL0 812 aaPredicted RBP18.67■□□□□ 0.58
COMMD6-209ENST00000477377 TNRC18O15417 2968 aaPredicted RBP18.66■□□□□ 0.58
COMMD6-209ENST00000477377 VCAM1P19320 739 aa18.66■□□□□ 0.58
COMMD6-209ENST00000477377 HERVK_113P62684 666 aa18.66■□□□□ 0.58
COMMD6-209ENST00000477377 CCDC129Q6ZRS4 1044 aa18.66■□□□□ 0.58
COMMD6-209ENST00000477377 TMEM179Q6ZVK1 233 aa18.66■□□□□ 0.58
COMMD6-209ENST00000477377 IFNL3Q8IZI9 196 aa18.66■□□□□ 0.58
COMMD6-209ENST00000477377 SH3TC2Q8TF17 1288 aa18.66■□□□□ 0.58
COMMD6-209ENST00000477377 MYPNQ86TC9 1320 aa18.66■□□□□ 0.58
COMMD6-209ENST00000477377 ROBO3Q96MS0 1386 aa18.66■□□□□ 0.58
COMMD6-209ENST00000477377 MPHOSPH10O00566 681 aaKnown RBP18.65■□□□□ 0.58
COMMD6-209ENST00000477377 CNMDO75829 334 aa18.65■□□□□ 0.58
COMMD6-209ENST00000477377 GNAT2P19087 354 aa18.65■□□□□ 0.58
COMMD6-209ENST00000477377 HOXD10P28358 340 aa18.65■□□□□ 0.58
COMMD6-209ENST00000477377 USP14P54578 494 aa18.65■□□□□ 0.58
COMMD6-209ENST00000477377 MLLT1Q03111 559 aaPredicted RBP18.65■□□□□ 0.58
COMMD6-209ENST00000477377 CCDC17Q96LX7 622 aa18.65■□□□□ 0.58
COMMD6-209ENST00000477377 GJD2Q9UKL4 321 aa18.65■□□□□ 0.58
COMMD6-209ENST00000477377 RASA1P20936 1047 aa18.64■□□□□ 0.57
COMMD6-209ENST00000477377 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.57
COMMD6-209ENST00000477377 LRRFIP1Q32MZ4 808 aaKnown RBP18.64■□□□□ 0.57
COMMD6-209ENST00000477377 SLC9C1Q4G0N8 1177 aa18.64■□□□□ 0.57
COMMD6-209ENST00000477377 FEZ1Q99689 392 aa18.64■□□□□ 0.57
COMMD6-209ENST00000477377 ZBTB47Q9UFB7 747 aaPredicted RBP18.64■□□□□ 0.57
COMMD6-209ENST00000477377 TMX2Q9Y320 296 aa18.64■□□□□ 0.57
COMMD6-209ENST00000477377 GREB1LQ9C091 1923 aaPredicted RBP18.64■□□□□ 0.57
COMMD6-209ENST00000477377 MINDY4BA8MYZ0 360 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L15C9J2P7 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L13C9JLJ4 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L11C9JVI0 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L18D6R9N7 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L22D6RA61 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L17D6RBQ6 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L19D6RCP7 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L20D6RJB6 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 FLT3LGP49771 235 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 USP17L24Q0WX57 530 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 VPS53Q5VIR6 699 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 FAM227BQ96M60 508 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 TACC3Q9Y6A5 838 aa18.63■□□□□ 0.57
COMMD6-209ENST00000477377 MYH8P13535 1937 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 RLFQ13129 1914 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 TNPO2O14787 897 aaKnown RBP18.62■□□□□ 0.57
COMMD6-209ENST00000477377 PDE4AP27815 886 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 IRF5Q13568 498 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 MTFR1Q15390 333 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 LBX2Q6XYB7 198 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 STK11IPQ8N1F8 1099 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 RBBP6Q7Z6E9 1792 aaKnown RBP18.62■□□□□ 0.57
COMMD6-209ENST00000477377 PLXNB2O15031 1838 aa18.62■□□□□ 0.57
COMMD6-209ENST00000477377 IGKV6D-41A0A0C4DH26 115 aa18.61■□□□□ 0.57
COMMD6-209ENST00000477377 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
COMMD6-209ENST00000477377 EEF2P13639 858 aaKnown RBP18.61■□□□□ 0.57
COMMD6-209ENST00000477377 EN2P19622 333 aaPredicted RBP18.61■□□□□ 0.57
COMMD6-209ENST00000477377 GRK4P32298 578 aa18.61■□□□□ 0.57
COMMD6-209ENST00000477377 ICA1Q05084 483 aa18.61■□□□□ 0.57
COMMD6-209ENST00000477377 NBPF11Q86T75 865 aa18.61■□□□□ 0.57
COMMD6-209ENST00000477377 GPRC5AQ8NFJ5 357 aa18.61■□□□□ 0.57
COMMD6-209ENST00000477377 RAET1EQ8TD07 263 aa18.61■□□□□ 0.57
COMMD6-209ENST00000477377 RPAP3Q9H6T3 665 aaPredicted RBP18.61■□□□□ 0.57
COMMD6-209ENST00000477377 HELLSQ9NRZ9 838 aa18.61■□□□□ 0.57
COMMD6-209ENST00000477377 KIAA0100Q14667 2235 aaKnown RBP18.6■□□□□ 0.57
COMMD6-209ENST00000477377 SPDYE16A6NNV3 312 aaPredicted RBP18.6■□□□□ 0.57
COMMD6-209ENST00000477377 APPP05067 770 aa18.6■□□□□ 0.57
COMMD6-209ENST00000477377 TDO2P48775 406 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms