RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 RPRD2Q5VT52 1461 aaKnown RBP8.21□□□□□ -1.09
CDKN1B-204ENST00000477087 COL17A1Q9UMD9 1497 aaPredicted RBP8.21□□□□□ -1.09
CDKN1B-204ENST00000477087 CDC37L1Q7L3B6 337 aa8.21□□□□□ -1.1
CDKN1B-204ENST00000477087 C12orf40Q86WS4 652 aa8.21□□□□□ -1.1
CDKN1B-204ENST00000477087 TOP6BLQ8N6T0 577 aa8.21□□□□□ -1.1
CDKN1B-204ENST00000477087 ZFYVE16Q7Z3T8 1539 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 DIP2BQ9P265 1576 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 CCDC85BQ15834 202 aaPredicted RBP8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 RASIP1Q5U651 963 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 TTBK2Q6IQ55 1244 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 AGBL5Q8NDL9 886 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 DUSP23Q9BVJ7 150 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 KANK1Q14678 1352 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 TONSLQ96HA7 1378 aa8.2□□□□□ -1.1
CDKN1B-204ENST00000477087 ATP7AQ04656 1500 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 KDM6BO15054 1643 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 FANCGO15287 622 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 LEFTY1O75610 366 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 RAPGEF3O95398 923 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 TAL1P17542 331 aaPredicted RBP8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 ABI1Q8IZP0 508 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 STK11IPQ8N1F8 1099 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 KCT2Q8NC54 265 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 NETO1Q8TDF5 533 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 SLC5A6Q9Y289 635 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 A2MP01023 1474 aa8.19□□□□□ -1.1
CDKN1B-204ENST00000477087 INO80Q9ULG1 1556 aaPredicted RBP8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 PRAMEF27A3QJZ7 478 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 KIF3BO15066 747 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 PAX4O43316 350 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 XPCQ01831 940 aaPredicted RBP8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 PSMD2Q13200 908 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 ZBTB37Q5TC79 503 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 HDXQ7Z353 690 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 FAM181AQ8N9Y4 354 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 MISP3Q96FF7 219 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 PTPRTO14522 1441 aa8.18□□□□□ -1.1
CDKN1B-204ENST00000477087 NPAS4Q8IUM7 802 aa8.17□□□□□ -1.1
CDKN1B-204ENST00000477087 ZNF507Q8TCN5 953 aa8.17□□□□□ -1.1
CDKN1B-204ENST00000477087 RNF19AQ9NV58 838 aa8.17□□□□□ -1.1
CDKN1B-204ENST00000477087 PARP2Q9UGN5 583 aa8.17□□□□□ -1.1
CDKN1B-204ENST00000477087 ADGRE2Q9UHX3 823 aa8.17□□□□□ -1.1
CDKN1B-204ENST00000477087 LMTK2Q8IWU2 1503 aa8.17□□□□□ -1.1
CDKN1B-204ENST00000477087 UNC13BO14795 1591 aa8.17□□□□□ -1.1
CDKN1B-204ENST00000477087 VWDEQ8N2E2 1590 aa8.17□□□□□ -1.1
CDKN1B-204ENST00000477087 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
CDKN1B-204ENST00000477087 RING1Q06587 406 aa8.16□□□□□ -1.1
CDKN1B-204ENST00000477087 ZMYM4Q5VZL5 1548 aa8.16□□□□□ -1.1
CDKN1B-204ENST00000477087 LRFN4Q6PJG9 635 aa8.16□□□□□ -1.1
CDKN1B-204ENST00000477087 PLD6Q8N2A8 252 aaKnown RBP8.16□□□□□ -1.1
CDKN1B-204ENST00000477087 MKNK2Q9HBH9 465 aa8.16□□□□□ -1.1
CDKN1B-204ENST00000477087 FAM135AQ9P2D6 1515 aa8.16□□□□□ -1.1
CDKN1B-204ENST00000477087 GTF2IRD1Q9UHL9 959 aa8.16□□□□□ -1.1
CDKN1B-204ENST00000477087 EIF2AK4Q9P2K8 1649 aaKnown RBP8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 PLA2R1Q13018 1463 aa8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 ARHGAP31Q2M1Z3 1444 aa8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 DAB2P98082 770 aa8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 INPP5AQ14642 412 aa8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 MAP3K11Q16584 847 aa8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 IFI16Q16666 785 aaKnown RBP8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 DNAJC14Q6Y2X3 702 aaPredicted RBP8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 BCL7CQ8WUZ0 217 aaPredicted RBP8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 PLPPR2Q96GM1 343 aa8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 PAK6Q9NQU5 681 aaPredicted RBP8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 PRDM10Q9NQV6 1147 aa8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 SNCAIPQ9Y6H5 919 aa8.15□□□□□ -1.1
CDKN1B-204ENST00000477087 REREQ9P2R6 1566 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 AGLP35573 1532 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 UHRF1BP1Q6BDS2 1440 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 CEACAM5P06731 702 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 ITIH2P19823 946 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 NTF4P34130 210 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 PTPN11Q06124 597 aaPredicted RBP8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 WIPI1Q5MNZ9 446 aaPredicted RBP8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 NFXL1Q6ZNB6 911 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 GAL3ST3Q96A11 431 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 KIDINS220Q9ULH0 1771 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 BCORL1Q5H9F3 1711 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 IQGAP3Q86VI3 1631 aa8.14□□□□□ -1.11
CDKN1B-204ENST00000477087 LRIG2O94898 1065 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 RLBP1P12271 317 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 LIG3P49916 1009 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 OXCT1P55809 520 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 ETF1P62495 437 aaKnown RBP8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 CCDC27Q2M243 656 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 MEI1Q5TIA1 1274 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 DIEXFQ68CQ4 756 aaKnown RBP8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 ZNF574Q6ZN55 896 aaPredicted RBP8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 CYFIP1Q7L576 1253 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 UBE3DQ7Z6J8 389 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 HRASLS5Q96KN8 279 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 GZF1Q9H116 711 aaPredicted RBP8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 VAV3Q9UKW4 847 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 DEPDC5O75140 1603 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 NEURL4Q96JN8 1562 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 HECW2Q9P2P5 1572 aa8.13□□□□□ -1.11
CDKN1B-204ENST00000477087 CCDC144AA2RUR9 1427 aa8.12□□□□□ -1.11
CDKN1B-204ENST00000477087 TMEM265A0A087WTH1 108 aa8.12□□□□□ -1.11
CDKN1B-204ENST00000477087 ERCC3P19447 782 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms