RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 HERC5Q9UII4 1024 aaKnown RBP19.08■□□□□ 0.64
SMG5-204ENST00000476954 RABGAP1Q9Y3P9 1069 aa19.08■□□□□ 0.64
SMG5-204ENST00000476954 CLTBP09497 229 aa19.07■□□□□ 0.64
SMG5-204ENST00000476954 FPGSQ05932 587 aa19.07■□□□□ 0.64
SMG5-204ENST00000476954 LRRC41Q15345 812 aa19.07■□□□□ 0.64
SMG5-204ENST00000476954 PRAMEF19Q5SWL8 479 aa19.07■□□□□ 0.64
SMG5-204ENST00000476954 GTF3C2Q8WUA4 911 aaPredicted RBP19.07■□□□□ 0.64
SMG5-204ENST00000476954 BTBD7Q9P203 1132 aa19.07■□□□□ 0.64
SMG5-204ENST00000476954 TACC3Q9Y6A5 838 aa19.07■□□□□ 0.64
SMG5-204ENST00000476954 CDK5RAP2Q96SN8 1893 aa19.07■□□□□ 0.64
SMG5-204ENST00000476954 KIAA0355O15063 1070 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 RAG1P15918 1043 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 ZYXQ15942 572 aaKnown RBP19.06■□□□□ 0.64
SMG5-204ENST00000476954 FAM47AQ5JRC9 791 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 C1orf53Q5VUE5 145 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 ERICH6Q7L0X2 663 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 IL27Q8NEV9 243 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 PBX4Q9BYU1 374 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 EPHX3Q9H6B9 360 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 ZBTB21Q9ULJ3 1066 aa19.06■□□□□ 0.64
SMG5-204ENST00000476954 GBF1Q92538 1859 aa19.05■□□□□ 0.64
SMG5-204ENST00000476954 CCNA1P78396 465 aa19.05■□□□□ 0.64
SMG5-204ENST00000476954 SPTY2D1Q68D10 685 aaPredicted RBP19.05■□□□□ 0.64
SMG5-204ENST00000476954 TBC1D9Q6ZT07 1266 aa19.05■□□□□ 0.64
SMG5-204ENST00000476954 TEX11Q8IYF3 940 aa19.05■□□□□ 0.64
SMG5-204ENST00000476954 SH3RF3Q8TEJ3 882 aaPredicted RBP19.05■□□□□ 0.64
SMG5-204ENST00000476954 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.05■□□□□ 0.644e-8■■□□□ 13.2
SMG5-204ENST00000476954 IVNS1ABPQ9Y6Y0 642 aa19.05■□□□□ 0.64
SMG5-204ENST00000476954 SEPT4O43236 478 aa19.04■□□□□ 0.64
SMG5-204ENST00000476954 PQBP1O60828 265 aaKnown RBP19.04■□□□□ 0.64
SMG5-204ENST00000476954 BMP1P13497 986 aa19.04■□□□□ 0.64
SMG5-204ENST00000476954 IGFBP4P22692 258 aa19.04■□□□□ 0.64
SMG5-204ENST00000476954 TFF2Q03403 129 aa19.04■□□□□ 0.64
SMG5-204ENST00000476954 USP17L2Q6R6M4 530 aa19.04■□□□□ 0.64
SMG5-204ENST00000476954 PI16Q6UXB8 463 aa19.04■□□□□ 0.64
SMG5-204ENST00000476954 PI4KBQ9UBF8 816 aa19.04■□□□□ 0.64
SMG5-204ENST00000476954 CIAO1O76071 339 aa19.03■□□□□ 0.64
SMG5-204ENST00000476954 TIMM10P62072 90 aa19.03■□□□□ 0.64
SMG5-204ENST00000476954 CCDC129Q6ZRS4 1044 aa19.03■□□□□ 0.64
SMG5-204ENST00000476954 NSUN4Q96CB9 384 aaKnown RBP19.03■□□□□ 0.64
SMG5-204ENST00000476954 PHF24Q9UPV7 400 aa19.03■□□□□ 0.64
SMG5-204ENST00000476954 PA2G4Q9UQ80 394 aaKnown RBP19.03■□□□□ 0.64
SMG5-204ENST00000476954 HCN4Q9Y3Q4 1203 aa19.03■□□□□ 0.64
SMG5-204ENST00000476954 PDS5AQ29RF7 1337 aaKnown RBP19.02■□□□□ 0.64
SMG5-204ENST00000476954 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L15C9J2P7 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L13C9JLJ4 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L11C9JVI0 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L18D6R9N7 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L22D6RA61 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L17D6RBQ6 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L19D6RCP7 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L20D6RJB6 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 ZBTB22O15209 634 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 USP17L24Q0WX57 530 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 C16orf59Q7L2K0 433 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 DPP9Q86TI2 863 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 TMEM39AQ9NV64 488 aa19.02■□□□□ 0.64
SMG5-204ENST00000476954 ARIH1Q9Y4X5 557 aaPredicted RBP19.02■□□□□ 0.64
SMG5-204ENST00000476954 COBLO75128 1261 aa19.01■□□□□ 0.63
SMG5-204ENST00000476954 ADORA2AP29274 412 aa19.01■□□□□ 0.63
SMG5-204ENST00000476954 KCNQ1P51787 676 aa19.01■□□□□ 0.63
SMG5-204ENST00000476954 OLFML2BQ68BL8 750 aa19.01■□□□□ 0.63
SMG5-204ENST00000476954 CATSPERGQ6ZRH7 1159 aa19.01■□□□□ 0.63
SMG5-204ENST00000476954 ALYREFQ86V81 257 aaKnown RBP19.01■□□□□ 0.63
SMG5-204ENST00000476954 MAPKAPK5Q8IW41 473 aa19.01■□□□□ 0.63
SMG5-204ENST00000476954 WDR63Q8IWG1 891 aa19.01■□□□□ 0.63
SMG5-204ENST00000476954 REV3LO60673 3130 aa19■□□□□ 0.63
SMG5-204ENST00000476954 LDHCP07864 332 aa19■□□□□ 0.63
SMG5-204ENST00000476954 FAAP100Q0VG06 881 aa19■□□□□ 0.63
SMG5-204ENST00000476954 C12orf42Q96LP6 360 aa19■□□□□ 0.63
SMG5-204ENST00000476954 CXXC1Q9P0U4 656 aaPredicted RBP19■□□□□ 0.63
SMG5-204ENST00000476954 HMG20BQ9P0W2 317 aa19■□□□□ 0.63
SMG5-204ENST00000476954 PALD1Q9ULE6 856 aa19■□□□□ 0.63
SMG5-204ENST00000476954 FOCADQ5VW36 1801 aa19■□□□□ 0.63
SMG5-204ENST00000476954 SPDYE16A6NNV3 312 aaPredicted RBP18.99■□□□□ 0.63
SMG5-204ENST00000476954 MAP4K4O95819 1239 aaPredicted RBP18.99■□□□□ 0.63
SMG5-204ENST00000476954 GSTO1P78417 241 aa18.99■□□□□ 0.63
SMG5-204ENST00000476954 CRACR2BQ8N4Y2 399 aaPredicted RBP18.99■□□□□ 0.63
SMG5-204ENST00000476954 XAGE2Q96GT9 111 aa18.99■□□□□ 0.63
SMG5-204ENST00000476954 FEZ1Q99689 392 aa18.99■□□□□ 0.63
SMG5-204ENST00000476954 RAI14Q9P0K7 980 aa18.99■□□□□ 0.63
SMG5-204ENST00000476954 ZNFX1Q9P2E3 1918 aaKnown RBP18.98■□□□□ 0.63
SMG5-204ENST00000476954 A0A1W2PQ45 241 aaPredicted RBP18.98■□□□□ 0.63
SMG5-204ENST00000476954 A0A1W2PQY0 241 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 PGK1P00558 417 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 GH2P01242 217 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 VCAM1P19320 739 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 IL15P40933 162 aaPredicted RBP18.98■□□□□ 0.63
SMG5-204ENST00000476954 TMEM240Q5SV17 173 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 RASIP1Q5U651 963 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
SMG5-204ENST00000476954 MICALL1Q8N3F8 863 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 SLC44A5Q8NCS7 719 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 TGFBRAP1Q8WUH2 860 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 MOV10L1Q9BXT6 1211 aaKnown RBP18.98■□□□□ 0.63
SMG5-204ENST00000476954 DHX36Q9H2U1 1008 aaKnown RBP18.98■□□□□ 0.63
SMG5-204ENST00000476954 NKX2-4Q9H2Z4 354 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 XPNPEP3Q9NQH7 507 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 SAP30BPQ9UHR5 308 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms