RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 PDE4DIPQ5VU43 2346 aa21.55■■□□□ 1.04
UPF3A-203ENST00000474056 GREB1LQ9C091 1923 aaPredicted RBP21.55■■□□□ 1.04
UPF3A-203ENST00000474056 PLXNB2O15031 1838 aa21.55■■□□□ 1.04
UPF3A-203ENST00000474056 POTEFA5A3E0 1075 aa21.54■■□□□ 1.04
UPF3A-203ENST00000474056 MPHOSPH10O00566 681 aaKnown RBP21.54■■□□□ 1.04
UPF3A-203ENST00000474056 GCLCP48506 637 aaPredicted RBP21.54■■□□□ 1.04
UPF3A-203ENST00000474056 PRKCZQ05513 592 aa21.54■■□□□ 1.04
UPF3A-203ENST00000474056 AMOTL1Q8IY63 956 aa21.54■■□□□ 1.04
UPF3A-203ENST00000474056 C12orf42Q96LP6 360 aa21.54■■□□□ 1.04
UPF3A-203ENST00000474056 P2RX7Q99572 595 aaKnown RBP21.54■■□□□ 1.04
UPF3A-203ENST00000474056 GABRQQ9UN88 632 aa21.54■■□□□ 1.04
UPF3A-203ENST00000474056 GSG1L2A8MUP6 293 aa21.53■■□□□ 1.04
UPF3A-203ENST00000474056 AKR1B1P15121 316 aa21.53■■□□□ 1.04
UPF3A-203ENST00000474056 CDK8P49336 464 aa21.53■■□□□ 1.04
UPF3A-203ENST00000474056 C16orf86Q6ZW13 317 aa21.53■■□□□ 1.04
UPF3A-203ENST00000474056 NBPF11Q86T75 865 aa21.53■■□□□ 1.04
UPF3A-203ENST00000474056 RAET1EQ8TD07 263 aa21.53■■□□□ 1.04
UPF3A-203ENST00000474056 SEC62Q99442 399 aaKnown RBP21.53■■□□□ 1.04
UPF3A-203ENST00000474056 RWDD1Q9H446 243 aaPredicted RBP21.53■■□□□ 1.04
UPF3A-203ENST00000474056 ARPP21Q9UBL0 812 aaPredicted RBP21.53■■□□□ 1.04
UPF3A-203ENST00000474056 TNPO2O14787 897 aaKnown RBP21.52■■□□□ 1.04
UPF3A-203ENST00000474056 PEX10O60683 326 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 IGHDP01880 384 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 USP14P54578 494 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 PDE1AP54750 535 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 LRRFIP1Q32MZ4 808 aaKnown RBP21.52■■□□□ 1.04
UPF3A-203ENST00000474056 SMC5Q8IY18 1101 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 LNPKQ9C0E8 428 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 KIAA1683Q9H0B3 1180 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 EPB41L4AQ9HCS5 686 aaPredicted RBP21.52■■□□□ 1.04
UPF3A-203ENST00000474056 STAP2Q9UGK3 403 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 TAOK2Q9UL54 1235 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 RLFQ13129 1914 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 PARP14Q460N5 1801 aa21.52■■□□□ 1.04
UPF3A-203ENST00000474056 A0A1W2PRG0 241 aa21.51■■□□□ 1.03
UPF3A-203ENST00000474056 MYCP01106 439 aaPredicted RBP21.51■■□□□ 1.03
UPF3A-203ENST00000474056 HERVK_113P62684 666 aa21.51■■□□□ 1.03
UPF3A-203ENST00000474056 B4GALNT3Q6L9W6 998 aa21.51■■□□□ 1.03
UPF3A-203ENST00000474056 TMEM179Q6ZVK1 233 aa21.51■■□□□ 1.03
UPF3A-203ENST00000474056 CLEC10AQ8IUN9 316 aa21.51■■□□□ 1.03
UPF3A-203ENST00000474056 MYH4Q9Y623 1939 aa21.51■■□□□ 1.03
UPF3A-203ENST00000474056 TNRC18O15417 2968 aaPredicted RBP21.51■■□□□ 1.03
UPF3A-203ENST00000474056 VCAM1P19320 739 aa21.5■■□□□ 1.03
UPF3A-203ENST00000474056 GRK4P32298 578 aa21.5■■□□□ 1.03
UPF3A-203ENST00000474056 SBK1Q52WX2 424 aa21.5■■□□□ 1.03
UPF3A-203ENST00000474056 ZMYM1Q5SVZ6 1142 aa21.5■■□□□ 1.03
UPF3A-203ENST00000474056 GIMAP6Q6P9H5 292 aa21.5■■□□□ 1.03
UPF3A-203ENST00000474056 TXNRD2Q9NNW7 524 aa21.5■■□□□ 1.03
UPF3A-203ENST00000474056 MORF4L1Q9UBU8 362 aa21.5■■□□□ 1.03
UPF3A-203ENST00000474056 FLT3LGP49771 235 aa21.49■■□□□ 1.03
UPF3A-203ENST00000474056 POTEEQ6S8J3 1075 aa21.49■■□□□ 1.03
UPF3A-203ENST00000474056 ROBO3Q96MS0 1386 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L15C9J2P7 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L13C9JLJ4 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L11C9JVI0 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L18D6R9N7 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L22D6RA61 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L17D6RBQ6 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L19D6RCP7 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L20D6RJB6 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 GNAT2P19087 354 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 USP17L24Q0WX57 530 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 CATSPERGQ6ZRH7 1159 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 STK11IPQ8N1F8 1099 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 COA7Q96BR5 231 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 CCDC17Q96LX7 622 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 TMEM106CQ9BVX2 250 aa21.48■■□□□ 1.03
UPF3A-203ENST00000474056 MINDY4BA8MYZ0 360 aa21.47■■□□□ 1.03
UPF3A-203ENST00000474056 TDO2P48775 406 aa21.47■■□□□ 1.03
UPF3A-203ENST00000474056 ICA1Q05084 483 aa21.47■■□□□ 1.03
UPF3A-203ENST00000474056 MTFR1Q15390 333 aa21.47■■□□□ 1.03
UPF3A-203ENST00000474056 SIAH1Q8IUQ4 282 aa21.47■■□□□ 1.03
UPF3A-203ENST00000474056 EVI5LQ96CN4 794 aa21.47■■□□□ 1.03
UPF3A-203ENST00000474056 PAGR1Q9BTK6 254 aa21.47■■□□□ 1.03
UPF3A-203ENST00000474056 RPAP3Q9H6T3 665 aaPredicted RBP21.47■■□□□ 1.03
UPF3A-203ENST00000474056 RBPJLQ9UBG7 517 aa21.47■■□□□ 1.03
UPF3A-203ENST00000474056 A0A0G2JMZ2 1700 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 COL11A1P12107 1806 aaPredicted RBP21.46■■□□□ 1.03
UPF3A-203ENST00000474056 PATL2C9JE40 543 aaKnown RBP21.46■■□□□ 1.03
UPF3A-203ENST00000474056 APPP05067 770 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 EN2P19622 333 aaPredicted RBP21.46■■□□□ 1.03
UPF3A-203ENST00000474056 ERVK-9P63128 1117 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 ERVK-24P63145 666 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 IRX6P78412 446 aaPredicted RBP21.46■■□□□ 1.03
UPF3A-203ENST00000474056 Q3C1V9 767 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 KIAA1755Q5JYT7 1200 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 CCDC129Q6ZRS4 1044 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 CHD1LQ86WJ1 897 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 IFNL3Q8IZI9 196 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 SLAIN1Q8ND83 568 aa21.46■■□□□ 1.03
UPF3A-203ENST00000474056 GTF3C2Q8WUA4 911 aaPredicted RBP21.46■■□□□ 1.03
UPF3A-203ENST00000474056 ADCY3O60266 1144 aa21.45■■□□□ 1.02
UPF3A-203ENST00000474056 CNMDO75829 334 aa21.45■■□□□ 1.02
UPF3A-203ENST00000474056 NUCB1Q02818 461 aa21.45■■□□□ 1.02
UPF3A-203ENST00000474056 IRF5Q13568 498 aa21.45■■□□□ 1.02
UPF3A-203ENST00000474056 GPRC5AQ8NFJ5 357 aa21.45■■□□□ 1.02
UPF3A-203ENST00000474056 ARHGEF10LQ9HCE6 1279 aa21.45■■□□□ 1.02
UPF3A-203ENST00000474056 MKI67P46013 3256 aaKnown RBP21.45■■□□□ 1.02
UPF3A-203ENST00000474056 ELNP15502 786 aa21.44■■□□□ 1.02
UPF3A-203ENST00000474056 RASA1P20936 1047 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms