RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NECAB3Q96P71 396 aaPredicted RBP4.57□□□□□ -1.68
CCDC39-203ENST00000473854 GPATCH2Q9NW75 528 aa4.57□□□□□ -1.68
CCDC39-203ENST00000473854 CNOT11Q9UKZ1 510 aaKnown RBP4.57□□□□□ -1.68
CCDC39-203ENST00000473854 PPM1HQ9ULR3 514 aa4.57□□□□□ -1.68
CCDC39-203ENST00000473854 PRAMEF27A3QJZ7 478 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 OR14I1A6ND48 311 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 TMEM88BA6NKF7 163 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 ZGLP1P0C6A0 271 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 TPP2P29144 1249 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-203ENST00000473854 ETF1P62495 437 aaKnown RBP4.56□□□□□ -1.68
CCDC39-203ENST00000473854 DUSP4Q13115 394 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 EPS8L3Q8TE67 593 aaKnown RBP4.56□□□□□ -1.68
CCDC39-203ENST00000473854 PPP1R13LQ8WUF5 828 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 ALKBH8Q96BT7 664 aaKnown RBP4.56□□□□□ -1.68
CCDC39-203ENST00000473854 BCO2Q9BYV7 579 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 WNT10AQ9GZT5 417 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 SP110Q9HB58 689 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 PALD1Q9ULE6 856 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 CYP8B1Q9UNU6 501 aa4.56□□□□□ -1.68
CCDC39-203ENST00000473854 SLC22A31A6NKX4 558 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 H3BRB1 525 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 SUV39H1O43463 412 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 CST3P01034 146 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-203ENST00000473854 PI3P19957 117 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 EGR3Q06889 387 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 SSPNQ14714 243 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 GAB4Q2WGN9 574 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 FRMD5Q7Z6J6 570 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 ANKS4BQ8N8V4 417 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 TMC1Q8TDI8 760 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 DACT3Q96B18 629 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-203ENST00000473854 NIF3L1Q9GZT8 377 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 TUT1Q9H6E5 874 aaKnown RBP4.55□□□□□ -1.68
CCDC39-203ENST00000473854 C19orf44Q9H6X5 657 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 LUC7LQ9NQ29 371 aaKnown RBP4.55□□□□□ -1.68
CCDC39-203ENST00000473854 DUSP13Q9UII6 198 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 SNCAIPQ9Y6H5 919 aa4.55□□□□□ -1.68
CCDC39-203ENST00000473854 BMP6P22004 513 aa4.54□□□□□ -1.68
CCDC39-203ENST00000473854 GSTT1P30711 240 aa4.54□□□□□ -1.68
CCDC39-203ENST00000473854 PLP2Q04941 152 aa4.54□□□□□ -1.68
CCDC39-203ENST00000473854 GPR20Q99678 358 aa4.54□□□□□ -1.68
CCDC39-203ENST00000473854 SRCIN1Q9C0H9 1055 aa4.54□□□□□ -1.68
CCDC39-203ENST00000473854 FBRSQ9HAH7 460 aa4.54□□□□□ -1.68
CCDC39-203ENST00000473854 SIRT5Q9NXA8 310 aa4.54□□□□□ -1.68
CCDC39-203ENST00000473854 GPR160Q9UJ42 338 aa4.54□□□□□ -1.68
CCDC39-203ENST00000473854 GPR182O15218 404 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 LTKP29376 864 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 PUM1Q14671 1186 aaKnown RBP eCLIP4.53□□□□□ -1.68
CCDC39-203ENST00000473854 PRAMEF13Q5VWM6 474 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 MPRIPQ6WCQ1 1025 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 FEZF2Q8TBJ5 459 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 GRIN3AQ8TCU5 1115 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 SGPP1Q9BX95 441 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 GPR62Q9BZJ7 368 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 KCNH3Q9ULD8 1083 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 TACC3Q9Y6A5 838 aa4.53□□□□□ -1.68
CCDC39-203ENST00000473854 N4BP3O15049 544 aa4.52□□□□□ -1.69
CCDC39-203ENST00000473854 PPP1R15AO75807 674 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-203ENST00000473854 INSRRP14616 1297 aa4.52□□□□□ -1.69
CCDC39-203ENST00000473854 SRSF3P84103 164 aaKnown RBP4.52□□□□□ -1.69
CCDC39-203ENST00000473854 ARHGAP4P98171 946 aa4.52□□□□□ -1.69
CCDC39-203ENST00000473854 NKG7Q16617 165 aa4.52□□□□□ -1.69
CCDC39-203ENST00000473854 LRFN4Q6PJG9 635 aa4.52□□□□□ -1.69
CCDC39-203ENST00000473854 TSPYL5Q86VY4 417 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-203ENST00000473854 RIN3Q8TB24 985 aa4.52□□□□□ -1.69
CCDC39-203ENST00000473854 ANKRD24Q8TF21 1146 aa4.52□□□□□ -1.69
CCDC39-203ENST00000473854 DUSP15Q9H1R2 295 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-203ENST00000473854 MBD1Q9UIS9 605 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-203ENST00000473854 ABLIM1O14639 778 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 ENC1O14682 589 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 TIGD5Q53EQ6 642 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 PHLDB3Q6NSJ2 640 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 TPTE2Q6XPS3 522 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 CDH24Q86UP0 819 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 ZDHHC14Q8IZN3 488 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 PLPPR2Q96GM1 343 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 BDH2Q9BUT1 245 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 SRRDQ9UH36 339 aa4.51□□□□□ -1.69
CCDC39-203ENST00000473854 CILPO75339 1184 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 INPP5AQ14642 412 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 ZNF827Q17R98 1081 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 ADGRF1Q5T601 910 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 CNKSR3Q6P9H4 555 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 NXPE4Q6UWF7 544 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 LINC01356Q8N9X3 169 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 C3orf58Q8NDZ4 430 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 XAGE3Q8WTP9 111 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 CRELD1Q96HD1 420 aa4.5□□□□□ -1.69
CCDC39-203ENST00000473854 K7ESM1 405 aa4.49□□□□□ -1.69
CCDC39-203ENST00000473854 TMEM62Q0P6H9 643 aa4.49□□□□□ -1.69
CCDC39-203ENST00000473854 WIPI1Q5MNZ9 446 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-203ENST00000473854 PCNX4Q63HM2 1172 aa4.49□□□□□ -1.69
CCDC39-203ENST00000473854 SLC6A19Q695T7 634 aa4.49□□□□□ -1.69
CCDC39-203ENST00000473854 MRPL41Q8IXM3 137 aaKnown RBP4.49□□□□□ -1.69
CCDC39-203ENST00000473854 PANK1Q8TE04 598 aa4.49□□□□□ -1.69
CCDC39-203ENST00000473854 RBCK1Q9BYM8 510 aa4.49□□□□□ -1.69
CCDC39-203ENST00000473854 CRTAC1Q9NQ79 661 aa4.49□□□□□ -1.69
CCDC39-203ENST00000473854 PCDHA11Q9Y5I1 949 aa4.49□□□□□ -1.69
CCDC39-203ENST00000473854 IRS4O14654 1257 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-203ENST00000473854 PAGE1O75459 146 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms